RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 RSPH1Q8WYR4 309 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 SMG7Q92540 1137 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 NXPE3Q969Y0 559 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 RIC8AQ9NPQ8 531 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 MRPL17Q9NRX2 175 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 GABBR1Q9UBS5 961 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 USP18Q9UMW8 372 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CFAP47Q6ZTR5 3102 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 PRR5-ARHGAP8B1AHC4 643 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 LILRB3O75022 631 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 GLUD1P00367 558 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 FOSP01100 380 aaPredicted RBP11.87□□□□□ -0.51
CLDND1-227ENST00000513452 URODP06132 367 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ADRB1P08588 477 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ADCY7P51828 1080 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ARHGAP8P85298 464 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CSTF1Q05048 431 aaKnown RBP11.87□□□□□ -0.51
CLDND1-227ENST00000513452 HTR4Q13639 388 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ELMSAN1Q6PJG2 1045 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 NIPA1Q7RTP0 329 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ATRIPQ8WXE1 791 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 RTKNQ9BST9 563 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 PIN4Q9Y237 131 aaKnown RBP11.87□□□□□ -0.51
CLDND1-227ENST00000513452 PCDHGA2Q9Y5H1 932 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 NUMBLQ9Y6R0 609 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 CACNA1IQ9P0X4 2223 aa11.87□□□□□ -0.51
CLDND1-227ENST00000513452 ANHXE9PGG2 379 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 PRC1O43663 620 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 OFD1O75665 1012 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 ADH1AP07327 375 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 PSAPP07602 524 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 LAMP2P13473 410 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 STARD6P59095 220 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
CLDND1-227ENST00000513452 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF707Q96C28 371 aaPredicted RBP11.86□□□□□ -0.51
CLDND1-227ENST00000513452 SHDQ96IW2 340 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF577Q9BSK1 485 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 RHOBTB2Q9BYZ6 727 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 PIDD1Q9HB75 910 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 CHST12Q9NRB3 414 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
CLDND1-227ENST00000513452 FBXO4Q9UKT5 387 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 SAMM50Q9Y512 469 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 PCDHA10Q9Y5I2 948 aa11.86□□□□□ -0.51
CLDND1-227ENST00000513452 BAHCC1Q9P281 2608 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 KANSL1LA0AUZ9 987 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SH2B2O14492 632 aaPredicted RBP11.85□□□□□ -0.51
CLDND1-227ENST00000513452 TEX28O15482 410 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 OATP04181 439 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 CALM1P0DP23 149 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 CALM2P0DP24 149 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 CALM3P0DP25 149 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SKIP12755 728 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SFPQP23246 707 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLDND1-227ENST00000513452 PRKCEQ02156 737 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 AP3B2Q13367 1082 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 DRP2Q13474 957 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SNW1Q13573 536 aaKnown RBP11.85□□□□□ -0.51
CLDND1-227ENST00000513452 UBXN2BQ14CS0 331 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 MICU3Q86XE3 530 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 SMC5Q8IY18 1101 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 URGCPQ8TCY9 931 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 RPS6KC1Q96S38 1066 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 TRAIPQ9BWF2 469 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
CLDND1-227ENST00000513452 EPC1Q9H2F5 836 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLDND1-227ENST00000513452 DPP7Q9UHL4 492 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 PATJQ8NI35 1801 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 DOCK8Q8NF50 2099 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 CNTNAP5Q8WYK1 1306 aa11.85□□□□□ -0.51
CLDND1-227ENST00000513452 MIA3Q5JRA6 1907 aa11.84□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF862O60290 1169 aa11.84□□□□□ -0.51
CLDND1-227ENST00000513452 DDHD2O94830 711 aa11.84□□□□□ -0.51
CLDND1-227ENST00000513452 SOD2P04179 222 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms