RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 INPPL1O15357 1258 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 TEX28O15482 410 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 DDAH1O94760 285 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 SPATA31D3P0C874 917 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 SREBF1P36956 1147 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 GNAQP50148 359 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CSTF1Q05048 431 aaKnown RBP12.68□□□□□ -0.38
RNF4-218ENST00000513284 SNW1Q13573 536 aaKnown RBP12.68□□□□□ -0.38
RNF4-218ENST00000513284 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 SPATA31D4Q6ZUB0 917 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 SMC5Q8IY18 1101 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CKAP2LQ8IYA6 745 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 BORCS6Q96GS4 357 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CHST12Q9NRB3 414 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 DACT1Q9NYF0 836 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 CDV3Q9UKY7 258 aaKnown RBP12.68□□□□□ -0.38
RNF4-218ENST00000513284 NUMBLQ9Y6R0 609 aa12.68□□□□□ -0.38
RNF4-218ENST00000513284 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
RNF4-218ENST00000513284 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 KANSL1LA0AUZ9 987 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 C2CD2LO14523 706 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SPTLC1O15269 473 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 ZNF623O75123 536 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 ALDH2P05091 517 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 CLK2P49760 499 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 LMNB2Q03252 620 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 FZD5Q13467 585 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 TSSK4Q6SA08 328 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 PARM1Q6UWI2 310 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 AGMOQ6ZNB7 445 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 PLA2G4DQ86XP0 818 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 FGF14Q92915 247 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 SPATA6Q9NWH7 488 aaPredicted RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 GABBR1Q9UBS5 961 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
RNF4-218ENST00000513284 INPP5FQ9Y2H2 1132 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 PCDHGA2Q9Y5H1 932 aa12.67□□□□□ -0.38
RNF4-218ENST00000513284 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 NRP1O14786 923 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 LAMTOR5O43504 91 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 CD72P21854 359 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 COL9A2Q14055 689 aaPredicted RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 TARBP2Q15633 366 aaKnown RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 LILRA6Q6PI73 481 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 STAMQ92783 540 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 ZSCAN32Q9NX65 697 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
RNF4-218ENST00000513284 CEP131Q9UPN4 1083 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 MYH9P35579 1960 aaKnown RBP12.66□□□□□ -0.38
RNF4-218ENST00000513284 ZZEF1O43149 2961 aa12.66□□□□□ -0.38
RNF4-218ENST00000513284 PATJQ8NI35 1801 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 ATRXP46100 2492 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 FAM170BA6NMN3 283 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 EDIL3O43854 480 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 FOSP01100 380 aaPredicted RBP12.65□□□□□ -0.38
RNF4-218ENST00000513284 SOD2P04179 222 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 TMOD1P28289 359 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 AK2P54819 239 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
RNF4-218ENST00000513284 FUT2Q10981 343 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 PPM1JQ5JR12 505 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 ZNF746Q6NUN9 644 aaPredicted RBP12.65□□□□□ -0.38
RNF4-218ENST00000513284 TMTC3Q6ZXV5 915 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 PCDHA10Q9Y5I2 948 aa12.65□□□□□ -0.38
RNF4-218ENST00000513284 A0A087WZ62 844 aa12.64□□□□□ -0.39
RNF4-218ENST00000513284 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms