RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PTENP60484 403 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 GTF2BQ00403 316 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
PDPN-210ENST00000513143 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
PDPN-210ENST00000513143 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 HAUS6Q7Z4H7 955 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
PDPN-210ENST00000513143 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 DHX38Q92620 1227 aaKnown RBP13.81□□□□□ -0.2
PDPN-210ENST00000513143 NLRP4Q96MN2 994 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 TOX2Q96NM4 488 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 TMEM134Q9H6X4 195 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
PDPN-210ENST00000513143 A0A087WZ62 844 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 CAND2O75155 1236 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 PPP1R2P41236 205 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 PHKA2P46019 1235 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 EFNA5P52803 228 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 RBL2Q08999 1139 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 BMT2Q1RMZ1 405 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
PDPN-210ENST00000513143 CT47A1Q5JQC4 288 aaPredicted RBP13.8□□□□□ -0.2
PDPN-210ENST00000513143 STXBP4Q6ZWJ1 553 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 GUF1Q8N442 669 aaKnown RBP13.8□□□□□ -0.2
PDPN-210ENST00000513143 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 FDXACB1Q9BRP7 624 aaPredicted RBP13.8□□□□□ -0.2
PDPN-210ENST00000513143 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 MAPK8IP1Q9UQF2 711 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 UBE4BO95155 1302 aa13.8□□□□□ -0.2
PDPN-210ENST00000513143 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 K7ERI5 159 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 TLR3O15455 904 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 PQBP1O60828 265 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 PRPF6O94906 941 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 KIF20AO95235 890 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 HOXD13P35453 343 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 CRYBB1P53674 252 aaPredicted RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 MGAT3Q09327 533 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 TMEM62Q0P6H9 643 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 STIM1Q13586 685 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 KIZQ2M2Z5 673 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 FAM26DQ5JW98 314 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 TAS1R3Q7RTX0 852 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 SRGAP1Q7Z6B7 1085 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 ZBTB8OSQ8IWT0 167 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 DHTKD1Q96HY7 919 aaPredicted RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 ZNF668Q96K58 619 aaPredicted RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 PPP1R16BQ96T49 567 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 CELF4Q9BZC1 486 aaKnown RBP13.79□□□□□ -0.2
PDPN-210ENST00000513143 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 PHLPP2Q6ZVD8 1323 aa13.79□□□□□ -0.2
PDPN-210ENST00000513143 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 M0QZ92 97 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 PSMA7O14818 248 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 CHRNA1P02708 482 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 CKBP12277 381 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 THPOP40225 353 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 TLE2Q04725 743 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 KCNA1Q09470 495 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 KNOP1Q1ED39 458 aaKnown RBP13.78□□□□□ -0.2
PDPN-210ENST00000513143 LRRC26Q2I0M4 334 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 ANO6Q4KMQ2 910 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 C11orf57Q6ZUT1 292 aaPredicted RBP13.78□□□□□ -0.2
PDPN-210ENST00000513143 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 ABHD8Q96I13 439 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 ACCSQ96QU6 501 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
PDPN-210ENST00000513143 DNAJC25Q9H1X3 360 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 FZD8Q9H461 694 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 MINDY3Q9H8M7 445 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 CDY2AQ9Y6F7 541 aa13.78□□□□□ -0.2
PDPN-210ENST00000513143 CAVIN2O95810 425 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
PDPN-210ENST00000513143 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.21
PDPN-210ENST00000513143 ERCC5P28715 1186 aaPredicted RBP13.77□□□□□ -0.21
PDPN-210ENST00000513143 FAAP100Q0VG06 881 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 MAPK6Q16659 721 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 FAM187BQ17R55 369 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 NELFCDQ8IXH7 590 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 OSMRQ99650 979 aa13.77□□□□□ -0.21
PDPN-210ENST00000513143 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms