RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NSUN4Q96CB9 384 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 PBKQ96KB5 322 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CLIC6Q96NY7 704 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MED15Q96RN5 788 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CARD6Q9BX69 1037 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 FSD1LQ9BXM9 530 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 OLA1Q9NTK5 396 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 RBAKQ9NYW8 714 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ADAM22Q9P0K1 906 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 G3BP2Q9UN86 482 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 MTMR6Q9Y217 621 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PTPRUQ92729 1446 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 LRRD1A4D1F6 860 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MAP3K13O43283 966 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TJP3O95049 919 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 NTSR2O95665 410 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MYBL1P10243 752 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 GYS1P13807 737 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ACADSBP45954 432 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SLC26A2P50443 739 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF131P52739 623 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RPL10AP62906 217 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ANO4Q32M45 955 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TDRD10Q5VZ19 366 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ANKRD13CQ8N6S4 541 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RAD54LQ92698 747 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF512Q96ME7 567 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 RIT2Q99578 217 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TSEN34Q9BSV6 310 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 MFSD1Q9H3U5 465 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KCND2Q9NZV8 630 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CLIC4Q9Y696 253 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 RGS12O14924 1447 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CCDC85CA6NKD9 419 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ATP11AP98196 1134 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CACNB1Q02641 598 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 TMED2Q15363 201 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MGAT5BQ3V5L5 792 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 FBXO33Q7Z6M2 555 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ADAT2Q7Z6V5 191 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ZNF467Q7Z7K2 595 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 PCGF5Q86SE9 256 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PHLDB2Q86SQ0 1253 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 FAM83AQ86UY5 434 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 TMEM199Q8N511 208 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MCUQ8NE86 351 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 AKAP7Q9P0M2 348 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 CCDC160A6NGH7 325 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 M0QYV0 167 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 SNX2O60749 519 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MYO1DO94832 1006 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 ATP6V1E1P36543 226 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 THPOP40225 353 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 APBA1Q02410 837 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KCNH2Q12809 1159 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PSMD6Q15008 389 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KRT71Q3SY84 523 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 NBPF10Q6P3W6 841 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 ITIH5Q86UX2 942 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PIGOQ8TEQ8 1089 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 LXNQ9BS40 222 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PPME1Q9Y570 386 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 CFAP65Q6ZU64 1925 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 PNPLA6Q8IY17 1366 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KIF3CO14782 793 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PLEKHA8P1O95397 391 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 KRT7P08729 469 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 VAMP7P51809 220 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 MMEL1Q495T6 779 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PDXDC1Q6P996 788 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 USP17L6PQ6QN14 398 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 PDCD6IPQ8WUM4 868 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 MRFAP1L1Q96HT8 127 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 EIF2AK1Q9BQI3 630 aaKnown RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 TMEM51Q9NW97 253 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 WDR35Q9P2L0 1181 aa4.54□□□□□ -1.68
VCAN-209ENST00000513016 EPN1Q9Y6I3 576 aaPredicted RBP4.54□□□□□ -1.68
VCAN-209ENST00000513016 GFPT2O94808 682 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ARHGEF7Q14155 803 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 CYFIP1Q7L576 1253 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 CDKL3Q8IVW4 592 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 USP13Q92995 863 aaPredicted RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 ALKBH8Q96BT7 664 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 ANKEF1Q9NU02 776 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 BRPF3Q9ULD4 1205 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 PRR12Q9ULL5 1215 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 HMGB3O15347 200 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 EVI5O60447 810 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ECEL1O95672 775 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 CSF1RP07333 972 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 RALBP11234 206 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 AKR1A1P14550 325 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 CAP2P40123 477 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MSH2P43246 934 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 HARS2P49590 506 aaKnown RBP4.53□□□□□ -1.68
VCAN-209ENST00000513016 VPS41P49754 854 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 FOXO4P98177 505 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 MTA1Q13330 715 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 ITPK1Q13572 414 aa4.53□□□□□ -1.68
VCAN-209ENST00000513016 DBN1Q16643 649 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms