RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 H0Y626 953 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ACSL4O60488 711 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 HOXC9P31274 260 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 HOXC12P31275 282 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CTNNA1P35221 906 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 CHRNDQ07001 517 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 TGM3Q08188 693 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 TAF13Q15543 124 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 BTN2A1Q7KYR7 527 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 C11orf74Q86VG3 221 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 MCEMP1Q8IX19 187 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 STARD7Q9NQZ5 370 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 RASSF10A6NK89 507 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ECE2O60344 883 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 POMCP01189 267 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CAPN1P07384 714 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 NFICP08651 508 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 MYL4P12829 197 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 NCF2P19878 526 aaPredicted RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 PSMA2P25787 234 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 PSMC2P35998 433 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 LONP1P36776 959 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 PSEN2P49810 448 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ARL4CP56559 192 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CDK17Q00537 523 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CDC42EP1Q00587 391 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 MESDQ14696 234 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 RELL1Q8IUW5 271 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 HDDC3Q8N4P3 179 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 FAR1Q8WVX9 515 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 RUNDC3BQ96NL0 473 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ADI1Q9BV57 179 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 IFNKQ9P0W0 207 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 PASKQ96RG2 1323 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 A8MXQ7 604 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 KRIT1O00522 736 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 HMOX2P30519 316 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 SLC16A2P36021 539 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 AVPR1AP37288 418 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 ESRRGP62508 458 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 CENPCQ03188 943 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 TMEM132DQ14C87 1099 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
VCAN-208ENST00000512590 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 GNASQ5JWF2 1037 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 SPDYAQ5MJ70 313 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 KLC2Q9H0B6 622 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 PARVGQ9HBI0 331 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 USP18Q9UMW8 372 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 LZTS1Q9Y250 596 aa9.49□□□□□ -0.89
VCAN-208ENST00000512590 H3BUI4 141 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 UBE3AQ05086 875 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 CTTNQ14247 550 aaKnown RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 TUBGCP2Q9BSJ2 902 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 REXO4Q9GZR2 422 aaKnown RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 VTI1BQ9UEU0 232 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 ALG6Q9Y672 507 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 CLDN3O15551 220 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 MBL2P11226 248 aaPredicted RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 POU5F1BQ06416 359 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 ZNF699Q32M78 642 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 SV2CQ496J9 727 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 CCDC92Q53HC0 331 aaPredicted RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 FAAH2Q6GMR7 532 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 FGD2Q7Z6J4 655 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 HDAC6Q9UBN7 1215 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 FHOD1Q9Y613 1164 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 XYLBO75191 536 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 DDIT3P35638 169 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 TBL3Q12788 808 aaKnown RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 TWF1Q12792 350 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 CCNG2Q16589 344 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 KRT71Q3SY84 523 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 TDRD10Q5VZ19 366 aaKnown RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 ACSF2Q96CM8 615 aaPredicted RBP9.48□□□□□ -0.89
VCAN-208ENST00000512590 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 KLHL11Q9NVR0 708 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 THEGQ9P2T0 379 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 FEM1BQ9UK73 627 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
VCAN-208ENST00000512590 AARSP49588 968 aaKnown RBP eCLIP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms