RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 EPHA7Q15375 998 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 EZH2Q15910 746 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SWSAP1Q6NVH7 229 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 GJB7Q6PEY0 223 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TRAPPC11Q7Z392 1133 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SP8Q8IXZ3 490 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CDKL2Q92772 493 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SCYL1Q96KG9 808 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TBC1D22BQ9NU19 505 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CPSF2Q9P2I0 782 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 OVOS2A0A0G2JMS6 1433 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CLDN3O15551 220 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 ADRA2BP18089 450 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 NAB2Q15742 525 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 EDRF1Q3B7T1 1238 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 CYFIP1Q7L576 1253 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SULF1Q8IWU6 871 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TMEM35BQ8NCS4 154 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 N4BP2L2Q92802 583 aaPredicted RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 CHMP6Q96FZ7 201 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 DNAJC7Q99615 494 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SMYD2Q9NRG4 433 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 AGLP35573 1532 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 A0A0G2JND7 137 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 GIPC1O14908 333 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TJP3O95049 919 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 HSPH1Q92598 858 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TTC17Q96AE7 1141 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 HEXIM2Q96MH2 286 aaKnown RBP8.62□□□□□ -1.03
NEK1-208ENST00000512193 STK33Q9BYT3 514 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 RNF146Q9NTX7 359 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TXLNGQ9NUQ3 528 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 PCSK1NQ9UHG2 260 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 SCINQ9Y6U3 715 aa8.62□□□□□ -1.03
NEK1-208ENST00000512193 TMEM131LA2VDJ0 1609 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 MROH1Q8NDA8 1641 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 A0A1W2PQJ5 194 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 PRPSAP2O60256 369 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 OPHN1O60890 802 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 COPB2P35606 906 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 KCNJ1P48048 391 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 FXR2P51116 673 aaKnown RBP eCLIP8.61□□□□□ -1.03
NEK1-208ENST00000512193 JAK3P52333 1124 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 SPARCL1Q14515 664 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 PPP6R3Q5H9R7 873 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 FAM47CQ5HY64 1035 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 MMGT1Q8N4V1 131 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 TTLL6Q8N841 843 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 PRPF38AQ8NAV1 312 aaKnown RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 FBXL13Q8NEE6 735 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 GPR75-ASB3A0A0A6YYF3 556 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 WTIPA6NIX2 430 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 GMNNO75496 209 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 BMP6P22004 513 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 LSP1P33241 339 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 SERPINB6P35237 376 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 BAG6P46379 1132 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 HERVK_113P62684 666 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 TAF11Q15544 211 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 EAPPQ56P03 285 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 KIAA1755Q5JYT7 1200 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 RASIP1Q5U651 963 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 SLFN12LQ6IEE8 588 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 CCHCR1Q8TD31 782 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 CFAP36Q96G28 342 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 DCTN4Q9UJW0 460 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 G3BP2Q9UN86 482 aaKnown RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 MAPK13O15264 365 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 TOM1L1O75674 476 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 ZBED1O96006 694 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 ESRRAP11474 423 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 SCP2P22307 547 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 KRT76Q01546 638 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 RSRC2Q7L4I2 434 aaKnown RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 EPM2AIP1Q7L775 607 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 USP38Q8NB14 1042 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 GABPB2Q8TAK5 448 aaPredicted RBP8.61□□□□□ -1.03
NEK1-208ENST00000512193 ARHGAP20Q9P2F6 1191 aa8.61□□□□□ -1.03
NEK1-208ENST00000512193 RPA1P27694 616 aa8.6□□□□□ -1.03
NEK1-208ENST00000512193 PPP4CP60510 307 aa8.6□□□□□ -1.03
NEK1-208ENST00000512193 GPS1Q13098 491 aa8.6□□□□□ -1.03
NEK1-208ENST00000512193 ZNF667Q5HYK9 610 aa8.6□□□□□ -1.03
NEK1-208ENST00000512193 SNRNP48Q6IEG0 339 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms