RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ST13P50502 369 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 EAPPQ56P03 285 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 C6orf118Q5T5N4 469 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 TC2NQ8N9U0 490 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 GFM2Q969S9 779 aaKnown RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 NDEL1Q9GZM8 345 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 ABCB11O95342 1321 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 GOLGA8IPA6NC78 632 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 GOLGA8JA6NMD2 632 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 NDUFB10O96000 172 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 FOXD4Q12950 439 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-209ENST00000512055 DCUN1D2Q6PH85 259 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 KIFC3Q9BVG8 833 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 JMJD4Q9H9V9 463 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
CPNE4-209ENST00000512055 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 IL9RQ01113 521 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 NFIAQ12857 509 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 KCNB1Q14721 858 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 TRIM56Q9BRZ2 755 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 MRPS26Q9BYN8 205 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 CCDC90BQ9GZT6 254 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 BZW2Q9Y6E2 419 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 CFLARO15519 480 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 SERPING1P05155 500 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 STRIP1Q5VSL9 837 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 HDAC11Q96DB2 347 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 RGL1Q9NZL6 768 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 HDAC6Q9UBN7 1215 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 IFNB1P01574 187 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 PLCB4Q15147 1175 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 GUF1Q8N442 669 aaKnown RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 C1orf112Q9NSG2 853 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 MYMKA6NI61 221 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 SPAG7O75391 227 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 SLC7A5Q01650 507 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 GFPT1Q06210 699 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 EXOC4Q96A65 974 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 OLFM3Q96PB7 478 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-209ENST00000512055 MRGBPQ9NV56 204 aa11.59□□□□□ -0.55
CPNE4-209ENST00000512055 THAP12O43422 761 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 KCNH2Q12809 1159 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 CEP78Q5JTW2 689 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 SULF1Q8IWU6 871 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 SCYL1Q96KG9 808 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 KMT5AQ9NQR1 393 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 LIMA1Q9UHB6 759 aaKnown RBP11.58□□□□□ -0.55
CPNE4-209ENST00000512055 TRPC6Q9Y210 931 aa11.58□□□□□ -0.55
CPNE4-209ENST00000512055 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 DAPK3O43293 454 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
CPNE4-209ENST00000512055 TRIM16O95361 564 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 MESDQ14696 234 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 ACCSQ96QU6 501 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-209ENST00000512055 FSCBQ5H9T9 825 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 APLFQ8IW19 511 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-209ENST00000512055 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 ING2Q9H160 280 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 STRIP2Q9ULQ0 834 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 TTLL3Q9Y4R7 772 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 SNX5Q9Y5X3 404 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 NR3C1P04150 777 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 USP14P54578 494 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 PEX3P56589 373 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 EVX2Q03828 476 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 WASHC5Q12768 1159 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 HHIPL2Q6UWX4 724 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 PDS5AQ29RF7 1337 aaKnown RBP11.58□□□□□ -0.56
CPNE4-209ENST00000512055 SLIT3O75094 1523 aa11.58□□□□□ -0.56
CPNE4-209ENST00000512055 PRR23D1E9PI22 279 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 DEAF1O75398 565 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 RHOBTB3O94955 611 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 PNMA6AP0CW24 399 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 PRR23D2P0DMB1 279 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 PDE6CP51160 858 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 ORC2Q13416 577 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 RAD9BQ6WBX8 426 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 RFWD2Q8NHY2 731 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 RMI1Q9H9A7 625 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
CPNE4-209ENST00000512055 WDR91A4D1P6 747 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 USP11P51784 963 aa11.57□□□□□ -0.56
CPNE4-209ENST00000512055 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms