RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RNF207Q6ZRF8 634 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 GAREM2Q75VX8 874 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 GPR135Q8IZ08 494 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 EXTL1Q92935 676 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 USP7Q93009 1102 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 PLEKHG4BQ96PX9 1271 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 MPHOSPH9Q99550 1183 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 ZNF747Q9BV97 191 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 TMX1Q9H3N1 280 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 C14orf93Q9H972 538 aaKnown RBP4.41□□□□□ -1.7
CHD1-207ENST00000511628 DDX56Q9NY93 547 aaKnown RBP4.41□□□□□ -1.7
CHD1-207ENST00000511628 MSRAQ9UJ68 235 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 USP18Q9UMW8 372 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 HS3ST3A1Q9Y663 406 aa4.41□□□□□ -1.7
CHD1-207ENST00000511628 UBE2QL1A1L167 161 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 PMS2P1A4D2B8 440 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 C2orf78A6NCI8 922 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 TOX4O94842 621 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 JUNP05412 331 aaKnown RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 HMGB1P09429 215 aaKnown RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 HNRNPLP14866 589 aaKnown RBP eCLIP4.4□□□□□ -1.71
CHD1-207ENST00000511628 ID4P47928 161 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 ADCY7P51828 1080 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 NRG3P56975 720 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 DSG1Q02413 1049 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 STRN3Q13033 797 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 FOXE3Q13461 319 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 LRRC32Q14392 662 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 R3HDM1Q15032 1099 aaKnown RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 FAM111BQ6SJ93 734 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 MAMDC4Q6UXC1 1216 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 SLC16A11Q8NCK7 471 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 ORAI3Q9BRQ5 295 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 IL23AQ9NPF7 189 aa4.4□□□□□ -1.71
CHD1-207ENST00000511628 AURKAIP1Q9NWT8 199 aaPredicted RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 USP36Q9P275 1121 aaKnown RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 REXO2Q9Y3B8 237 aaKnown RBP4.4□□□□□ -1.71
CHD1-207ENST00000511628 A0A0A6YYJ9 748 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 NRP2O60462 931 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 OPHN1O60890 802 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 MFAP3LO75121 409 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 FKBP9O95302 570 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 ACRV1P26436 265 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 LSSP48449 732 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 PTH1RQ03431 593 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 FAM50AQ14320 339 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 ELAVL1Q15717 326 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 DDB1Q16531 1140 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 LSM12Q3MHD2 195 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 GAGE13Q4V321 117 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 CT47A1Q5JQC4 288 aaPredicted RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 LMBR1LQ6UX01 489 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 FKBP9P1Q75LS8 142 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 DDX46Q7L014 1031 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 CLEC14AQ86T13 490 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 BCL6BQ8N143 479 aaPredicted RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 SMC1BQ8NDV3 1235 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 ZMAT4Q9H898 229 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 PARPBPQ9NWS1 579 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 KLHL42Q9P2K6 505 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 NOC2LQ9Y3T9 749 aaKnown RBP4.39□□□□□ -1.71
CHD1-207ENST00000511628 PCDHB6Q9Y5E3 794 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 MYPNQ86TC9 1320 aa4.39□□□□□ -1.71
CHD1-207ENST00000511628 NPIPB8E9PQR5 432 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 NEMP1O14524 444 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 NRP1O14786 923 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
CHD1-207ENST00000511628 PDGFRBP09619 1106 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 KIR2DL3P43628 341 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 SMAD3P84022 425 aaKnown RBP4.38□□□□□ -1.71
CHD1-207ENST00000511628 ABHD18Q0P651 414 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 DUSP8Q13202 625 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 ATP13A4Q4VNC1 1196 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 BRDTQ58F21 947 aaPredicted RBP4.38□□□□□ -1.71
CHD1-207ENST00000511628 FKBP15Q5T1M5 1219 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 CREB3L3Q68CJ9 461 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 MFSD5Q6N075 450 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 UNQ6494/PRO21346Q6UXR6 183 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 Q6ZSN1 163 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 FRMD7Q6ZUT3 714 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 ZFPM1Q8IX07 1006 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 CDYL2Q8N8U2 506 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 ZNF610Q8N9Z0 462 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 OR5M3Q8NGP4 307 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 NKD2Q969F2 451 aaPredicted RBP4.38□□□□□ -1.71
CHD1-207ENST00000511628 FAM193BQ96PV7 902 aaPredicted RBP4.38□□□□□ -1.71
CHD1-207ENST00000511628 SPTLC3Q9NUV7 552 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
CHD1-207ENST00000511628 CYR61O00622 381 aa4.37□□□□□ -1.71
CHD1-207ENST00000511628 IPO13O94829 963 aaKnown RBP4.37□□□□□ -1.71
CHD1-207ENST00000511628 ZNF202O95125 648 aa4.37□□□□□ -1.71
CHD1-207ENST00000511628 BPIP17213 487 aa4.37□□□□□ -1.71
CHD1-207ENST00000511628 GNAT2P19087 354 aa4.37□□□□□ -1.71
CHD1-207ENST00000511628 MCM7P33993 719 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms