RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 HTR1BP28222 390 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 STAT5AP42229 794 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 CACNB2Q08289 660 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 SKIDA1Q1XH10 827 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 C3orf36Q3SXR2 165 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 FAM83BQ5T0W9 1011 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 ADGRF1Q5T601 910 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 OLFML2BQ68BL8 750 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 NPNTQ6UXI9 565 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 OR5AN1Q8NGI8 311 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 ALG3Q92685 438 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 HOXB13Q92826 284 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 CGRRF1Q99675 332 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 SOX7Q9BT81 388 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 OSBPL6Q9BZF3 934 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 KMT5AQ9NQR1 393 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 RBM12Q9NTZ6 932 aaKnown RBP6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
HMGB1P47-201ENST00000511281 A0A088AWK7 358 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 SGTAO43765 313 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 IL18BPO95998 194 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 FURINP09958 794 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 SDHBP21912 280 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 XPAP23025 273 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 NRG3P56975 720 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 IL13RA1P78552 427 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 MAP3K12Q12852 859 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 DGKDQ16760 1214 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 KIAA0753Q2KHM9 967 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 GRAMD1BQ3KR37 738 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 THEMIS2Q5TEJ8 643 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 CCDC149Q6ZUS6 474 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 MIGA2Q7L4E1 593 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 FAM186BQ8IYM0 893 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 NSUN6Q8TEA1 469 aaKnown RBP6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 TNIP3Q96KP6 325 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 MYD88Q99836 296 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 ADI1Q9BV57 179 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 BHMT2Q9H2M3 363 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 PLCB1Q9NQ66 1216 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 RBPJLQ9UBG7 517 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 PUF60Q9UHX1 559 aaKnown RBP6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 USP18Q9UMW8 372 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 STXBP5LQ9Y2K9 1186 aa6.83□□□□□ -1.32
HMGB1P47-201ENST00000511281 A0A1W2PR48 441 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 CAPN8A6NHC0 703 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 ADAMTS4O75173 837 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 CHGBP05060 677 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 C8BP07358 591 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 MYBP10242 640 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 SSTR4P31391 388 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 GPSM2P81274 684 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 LLGL1Q15334 1064 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZRSR2Q15696 482 aaKnown RBP6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 RNF220Q5VTB9 566 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 DPP8Q6V1X1 898 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 TP53INP2Q8IXH6 220 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 PGBD4Q96DM1 585 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 KIRREL1Q96J84 757 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 BTBD1Q9H0C5 482 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 RSAD1Q9HA92 442 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 KCND1Q9NSA2 647 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 INTUQ9ULD6 942 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 DAAM1Q9Y4D1 1078 aa6.82□□□□□ -1.32
HMGB1P47-201ENST00000511281 ABHD14A-ACY1A0A1B0GW23 586 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 TMEM127O75204 238 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 FOSP01100 380 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 RPLP2P05387 115 aaKnown RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 NCAM1P13591 858 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 GSPT1P15170 499 aaKnown RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 ZKSCAN1P17029 563 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 CCT2P78371 535 aaKnown RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 POLD3Q15054 466 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 CNN3Q15417 329 aaKnown RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 SWSAP1Q6NVH7 229 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 MAEAQ7L5Y9 396 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 SRLQ86TD4 932 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 IFNL2Q8IZJ0 200 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 FAM26EQ8N5C1 309 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 GPR156Q8NFN8 814 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 OR2I1PQ8NGU4 316 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 CDK5RAP3Q96JB5 506 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 NUP62CLQ9H1M0 184 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 BCAS3Q9H6U6 928 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 PTPRHQ9HD43 1115 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 ARHGAP20Q9P2F6 1191 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
HMGB1P47-201ENST00000511281 TCEA3O75764 348 aa6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 RPL17P18621 184 aaKnown RBP6.8□□□□□ -1.32
HMGB1P47-201ENST00000511281 PEX2P28328 305 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms