RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 MRPL43Q8N983 215 aaKnown RBP14.12□□□□□ -0.15
KDM3B-206ENST00000509468 GTF3C6Q969F1 213 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 LXNQ9BS40 222 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 IFT122Q9HBG6 1241 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 FAM105AQ9NUU6 356 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 RGL1Q9NZL6 768 aa14.12□□□□□ -0.15
KDM3B-206ENST00000509468 BARX2Q9UMQ3 279 aaPredicted RBP14.12□□□□□ -0.15
KDM3B-206ENST00000509468 SLITRK3O94933 977 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 HOXB8P17481 243 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 ATF7P17544 494 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 LAMTOR4Q0VGL1 99 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 NR5A1Q13285 461 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 MXD4Q14582 209 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 PCBP1Q15365 356 aaKnown RBP eCLIP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 XKR9Q5GH70 373 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 HERC4Q5GLZ8 1057 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 NOMO2Q5JPE7 1267 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 SLC39A11Q8N1S5 342 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 ZNF579Q8NAF0 562 aaKnown RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 TMEM143Q96AN5 459 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 TMEM169Q96HH4 297 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 DYDC2Q96IM9 177 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 PHF7Q9BWX1 381 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 KANSL3Q9P2N6 904 aa14.11□□□□□ -0.15
KDM3B-206ENST00000509468 USP15Q9Y4E8 981 aaPredicted RBP14.11□□□□□ -0.15
KDM3B-206ENST00000509468 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 BTBD18B2RXH4 712 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 OFD1O75665 1012 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 CXCL14O95715 111 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 TECP42680 631 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 RNASELQ05823 741 aaKnown RBP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 KCNC3Q14003 757 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 GIT2Q14161 759 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 CTTNQ14247 550 aaKnown RBP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 CALCRLQ16602 461 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 EARS2Q5JPH6 523 aaKnown RBP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 ANKRD54Q6NXT1 300 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 MRPL10Q7Z7H8 261 aaKnown RBP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 TMEM87AQ8NBN3 555 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 URGCPQ8TCY9 931 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 HSD17B14Q9BPX1 270 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 UBN1Q9NPG3 1134 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 ANKEF1Q9NU02 776 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 AGPAT5Q9NUQ2 364 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 WRAP73Q9P2S5 460 aaPredicted RBP14.1□□□□□ -0.15
KDM3B-206ENST00000509468 STK39Q9UEW8 545 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 PCDHB2Q9Y5E7 798 aa14.1□□□□□ -0.15
KDM3B-206ENST00000509468 C5orf42Q9H799 3197 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 C2orf71A6NGG8 1288 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 LOC730098B7Z3J9 87 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 DTNBO60941 627 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 LYPLA2O95372 231 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 ALDH2P05091 517 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 PBX3P40426 434 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 TFDP1Q14186 410 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 EMC2Q15006 297 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 SAFBQ15424 915 aaKnown RBP eCLIP14.09□□□□□ -0.15
KDM3B-206ENST00000509468 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
KDM3B-206ENST00000509468 FERMT3Q86UX7 667 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
KDM3B-206ENST00000509468 VN1R2Q8NFZ6 395 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 SUSD6Q92537 303 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 EDAQ92838 391 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 CASP10Q92851 521 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 LPPQ93052 612 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 MTRQ99707 1265 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 EIF2AK1Q9BQI3 630 aaKnown RBP14.09□□□□□ -0.15
KDM3B-206ENST00000509468 S1PR5Q9H228 398 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
KDM3B-206ENST00000509468 TBC1D13Q9NVG8 400 aa14.09□□□□□ -0.15
KDM3B-206ENST00000509468 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
KDM3B-206ENST00000509468 DGAT1O75907 488 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 GALTP07902 379 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 AXLP30530 894 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 TXKP42681 527 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
KDM3B-206ENST00000509468 CYP4A11Q02928 519 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 CBX2Q14781 532 aaPredicted RBP14.08□□□□□ -0.16
KDM3B-206ENST00000509468 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 CES5AQ6NT32 575 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
KDM3B-206ENST00000509468 VPS52Q8N1B4 723 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 IGSF21Q96ID5 467 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 MFSD14AQ96MC6 490 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
KDM3B-206ENST00000509468 KCNH6Q9H252 994 aa14.08□□□□□ -0.16
KDM3B-206ENST00000509468 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms