RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 IFT122Q9HBG6 1241 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 TBC1D7Q9P0N9 293 aa16.36■□□□□ 0.21
RNF4-213ENST00000509388 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
RNF4-213ENST00000509388 ERLIN2O94905 339 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
RNF4-213ENST00000509388 CSF2RAP15509 400 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 SCP2P22307 547 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 ABCD1P33897 745 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 DPYDQ12882 1025 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 STRN3Q13033 797 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 COASYQ13057 564 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 LPIN1Q14693 890 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 PCBP1Q15365 356 aaKnown RBP eCLIP16.35■□□□□ 0.21
RNF4-213ENST00000509388 MAPK6Q16659 721 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 TMEM132AQ24JP5 1023 aa16.35■□□□□ 0.21
RNF4-213ENST00000509388 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
RNF4-213ENST00000509388 PRMT7Q9NVM4 692 aaPredicted RBP16.35■□□□□ 0.21
RNF4-213ENST00000509388 NOC2LQ9Y3T9 749 aaKnown RBP16.35■□□□□ 0.21
RNF4-213ENST00000509388 FRMD3A2A2Y4 597 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 DENND3A2RUS2 1198 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 NBNO60934 754 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 GCNT3O95395 438 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 PFKMP08237 780 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 CD52P31358 61 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
RNF4-213ENST00000509388 PSMD2Q13200 908 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 KMT5BQ4FZB7 885 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 FAM26FQ5R3K3 315 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 CDCA2Q69YH5 1023 aaPredicted RBP16.34■□□□□ 0.21
RNF4-213ENST00000509388 HAUS6Q7Z4H7 955 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
RNF4-213ENST00000509388 TMEM40Q8WWA1 233 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 CLSTN2Q9H4D0 955 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 TMEM134Q9H6X4 195 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 ST3GAL5Q9UNP4 418 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 LOXHD1Q8IVV2 1947 aa16.34■□□□□ 0.21
RNF4-213ENST00000509388 ACTN1P12814 892 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 FGFR4P22455 802 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 NCKAP1LP55160 1127 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 MBTD1Q05BQ5 628 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 MBTPS1Q14703 1052 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 ZNF720Q7Z2F6 126 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 TMEM161BQ8NDZ6 487 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 APBB2Q92870 758 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 SYAP1Q96A49 352 aaPredicted RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 GSDMAQ96QA5 445 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 AGO3Q9H9G7 860 aaKnown RBP16.33■□□□□ 0.2
RNF4-213ENST00000509388 IL23AQ9NPF7 189 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 OLFML3Q9NRN5 406 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
RNF4-213ENST00000509388 KLRC4O43908 158 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 CXCL10P02778 98 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 PRKCBP05771 671 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 ACRP10323 421 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 PRPF4BQ13523 1007 aaKnown RBP16.32■□□□□ 0.2
RNF4-213ENST00000509388 ALCAMQ13740 583 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 TRIP12Q14669 1992 aaPredicted RBP16.32■□□□□ 0.2
RNF4-213ENST00000509388 KCNB1Q14721 858 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 ARID2Q68CP9 1835 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 FAM43BQ6ZT52 329 aaPredicted RBP16.32■□□□□ 0.2
RNF4-213ENST00000509388 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 HPS3Q969F9 1004 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 BICD1Q96G01 975 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 PRIMPOLQ96LW4 560 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 FTHL17Q9BXU8 183 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 FZD8Q9H461 694 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 MINDY3Q9H8M7 445 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 SLC39A2Q9NP94 309 aa16.32■□□□□ 0.2
RNF4-213ENST00000509388 ADGRA3Q8IWK6 1321 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 ACKR2O00590 384 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 KIF20AO95235 890 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 FGBP02675 491 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 AXLP30530 894 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 IKBKEQ14164 716 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 GPNMBQ14956 572 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 PLEKHG4Q58EX7 1191 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 PSRC1Q6PGN9 363 aaPredicted RBP16.31■□□□□ 0.2
RNF4-213ENST00000509388 HVCN1Q96D96 273 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 MRPL4Q9BYD3 311 aaKnown RBP16.31■□□□□ 0.2
RNF4-213ENST00000509388 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
RNF4-213ENST00000509388 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 TBX20Q9UMR3 447 aa16.31■□□□□ 0.2
RNF4-213ENST00000509388 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms