RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 E2F7Q96AV8 911 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 ZNF778Q96MU6 729 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 WDR92Q96MX6 357 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 CPPED1Q9BRF8 314 aaPredicted RBP3.63□□□□□ -1.83
XRCC4-204ENST00000509268 SEMA4GQ9NTN9 838 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 NCDNQ9UBB6 729 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 TRAF6Q9Y4K3 522 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 PCDHA8Q9Y5H6 950 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 MRVI1Q9Y6F6 885 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 CCDC66A2RUB6 948 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 RASSF10A6NK89 507 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 KCNK3O14649 394 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 PROP1O75360 226 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 NDUFA10O95299 355 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 MATN4O95460 622 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 VAMP1P23763 118 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 BEAN1Q3B7T3 259 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 NT5DC4Q86YG4 428 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 OR52N2Q8NGI0 321 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 PTPRN2Q92932 1015 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 TRPM5Q9NZQ8 1165 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 KCMF1Q9P0J7 381 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 MAGEL2Q9UJ55 1249 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.63□□□□□ -1.83
XRCC4-204ENST00000509268 INPP5FQ9Y2H2 1132 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 B3GALT1Q9Y5Z6 326 aa3.63□□□□□ -1.83
XRCC4-204ENST00000509268 DIRC3C9JPN6 131 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 NCR1O76036 304 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 SSBP05455 408 aaKnown RBP eCLIP3.62□□□□□ -1.83
XRCC4-204ENST00000509268 CBSLP0DN79 551 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 CBSP35520 551 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 MPLP40238 635 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 GUCY1A3Q02108 690 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 ZNF425Q6IV72 752 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 PLXDC1Q8IUK5 500 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 CLCA2Q9UQC9 943 aa3.62□□□□□ -1.83
XRCC4-204ENST00000509268 STC2O76061 302 aa3.61□□□□□ -1.83
XRCC4-204ENST00000509268 HLA-DOAP06340 250 aa3.61□□□□□ -1.83
XRCC4-204ENST00000509268 SRGAP2CP0DJJ0 459 aa3.61□□□□□ -1.83
XRCC4-204ENST00000509268 ROM1Q03395 351 aa3.61□□□□□ -1.83
XRCC4-204ENST00000509268 SRSF4Q08170 494 aaKnown RBP3.61□□□□□ -1.83
XRCC4-204ENST00000509268 LRRC47Q8N1G4 583 aaKnown RBP3.61□□□□□ -1.83
XRCC4-204ENST00000509268 FOXRED1Q96CU9 486 aaPredicted RBP3.61□□□□□ -1.83
XRCC4-204ENST00000509268 CHST2Q9Y4C5 530 aa3.61□□□□□ -1.83
XRCC4-204ENST00000509268 NRP1O14786 923 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 DNAJC6O75061 913 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 APOBEC3AP31941 199 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-204ENST00000509268 PLA2G5P39877 138 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 DNM2P50570 870 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 PTTG1IPP53801 180 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 CATSPEREQ5SY80 951 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 KIAA1614Q5VZ46 1190 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 CRELD2Q6UXH1 353 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-204ENST00000509268 BMP8AQ7Z5Y6 402 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 RTN4RL1Q86UN2 441 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-204ENST00000509268 VPS37DQ86XT2 251 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 DYDC2Q96IM9 177 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 TGIF2Q9GZN2 237 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 HAPLN2Q9GZV7 340 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 ENKD1Q9H0I2 346 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 KIAA1586Q9HCI6 787 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 POLR3BQ9NW08 1133 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-204ENST00000509268 ZNF70Q9UC06 446 aaPredicted RBP3.6□□□□□ -1.83
XRCC4-204ENST00000509268 MAST3O60307 1309 aa3.6□□□□□ -1.83
XRCC4-204ENST00000509268 RECKO95980 971 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 EGR2P11161 476 aaPredicted RBP3.59□□□□□ -1.83
XRCC4-204ENST00000509268 RARRES1P49788 294 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 TMEM132BQ14DG7 1078 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 TM4SF20Q53R12 229 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 ARMC6Q6NXE6 501 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 DOK3Q7L591 496 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 SH2D3CQ8N5H7 860 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 ADGRE3Q9BY15 652 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 GZF1Q9H116 711 aaPredicted RBP3.59□□□□□ -1.83
XRCC4-204ENST00000509268 SYNPO2Q9UMS6 1093 aa3.59□□□□□ -1.83
XRCC4-204ENST00000509268 CGB1A6NKQ9 187 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 C1QL1O75973 258 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 ETFBP38117 255 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 WNT3AP56704 352 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 ZNF169Q14929 603 aaPredicted RBP3.59□□□□□ -1.84
XRCC4-204ENST00000509268 MAN2A1Q16706 1144 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 CPEB3Q8NE35 698 aaKnown RBP3.59□□□□□ -1.84
XRCC4-204ENST00000509268 ST13P5Q8NFI4 369 aaPredicted RBP3.59□□□□□ -1.84
XRCC4-204ENST00000509268 ERCC4Q92889 916 aaPredicted RBP3.59□□□□□ -1.84
XRCC4-204ENST00000509268 CPEB1Q9BZB8 566 aaKnown RBP3.59□□□□□ -1.84
XRCC4-204ENST00000509268 OSBPL6Q9BZF3 934 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 HDAC5Q9UQL6 1122 aa3.59□□□□□ -1.84
XRCC4-204ENST00000509268 HIP1RO75146 1068 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 PDIA4P13667 645 aaKnown RBP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 ZSCAN20P17040 1043 aaPredicted RBP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 DDX6P26196 483 aaKnown RBP eCLIP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 CACNA2D1P54289 1103 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 HDLBPQ00341 1268 aaKnown RBP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 FAM214AQ32MH5 1076 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 KLHL22Q53GT1 634 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 YOD1Q5VVQ6 348 aaPredicted RBP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 CC2D1AQ6P1N0 951 aaPredicted RBP3.58□□□□□ -1.84
XRCC4-204ENST00000509268 ARHGEF25Q86VW2 580 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 MAML3Q96JK9 1138 aa3.58□□□□□ -1.84
XRCC4-204ENST00000509268 EPC1Q9H2F5 836 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms