RNA–Protein interactions for RNA: ENST00000509255.1

DDX46-209, Transcript of DEAD-box helicase 46, humanhuman

TSL 2

Gene DDX46, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-209ENST00000509255 ZNF768Q9H5H4 540 aaKnown RBP3.02□□□□□ -1.93
DDX46-209ENST00000509255 ZNF408Q9H9D4 720 aa3.02□□□□□ -1.93
DDX46-209ENST00000509255 NCDNQ9UBB6 729 aa3.02□□□□□ -1.93
DDX46-209ENST00000509255 B3GALT1Q9Y5Z6 326 aa3.02□□□□□ -1.93
DDX46-209ENST00000509255 AHRRA9YTQ3 701 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 RNASET2O00584 256 aaKnown RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 HMGB1P09429 215 aaKnown RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 GTF2F1P35269 517 aaKnown RBP eCLIP3.01□□□□□ -1.93
DDX46-209ENST00000509255 KIR2DL3P43628 341 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 PTH2RP49190 550 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 SEC24CP53992 1094 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 TMEM132BQ14DG7 1078 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 SF3A1Q15459 793 aaKnown RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 CCDC144BQ3MJ40 725 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 CATSPEREQ5SY80 951 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 RTN4RL1Q86UN2 441 aaPredicted RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 CELF2-AS1Q8N7Q2 184 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 LINC00476Q8WZB0 136 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 ERCC4Q92889 916 aaPredicted RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 PDCD2LQ9BRP1 358 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 LRFN3Q9BTN0 628 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 PIF1Q9H611 641 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 C14orf93Q9H972 538 aaKnown RBP3.01□□□□□ -1.93
DDX46-209ENST00000509255 KCMF1Q9P0J7 381 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 ANKFY1Q9P2R3 1169 aa3.01□□□□□ -1.93
DDX46-209ENST00000509255 GAGE12BA1L429 117 aa3□□□□□ -1.93
DDX46-209ENST00000509255 GAGE12HA6NDE8 117 aa3□□□□□ -1.93
DDX46-209ENST00000509255 MTSS1O43312 755 aa3□□□□□ -1.93
DDX46-209ENST00000509255 HIP1RO75146 1068 aa3□□□□□ -1.93
DDX46-209ENST00000509255 APPP05067 770 aa3□□□□□ -1.93
DDX46-209ENST00000509255 SUMO1P63165 101 aaKnown RBP3□□□□□ -1.93
DDX46-209ENST00000509255 GABREP78334 506 aa3□□□□□ -1.93
DDX46-209ENST00000509255 BLOC1S1P78537 153 aa3□□□□□ -1.93
DDX46-209ENST00000509255 ROM1Q03395 351 aa3□□□□□ -1.93
DDX46-209ENST00000509255 FOXF2Q12947 444 aa3□□□□□ -1.93
DDX46-209ENST00000509255 FOXI1Q12951 378 aa3□□□□□ -1.93
DDX46-209ENST00000509255 SP5Q6BEB4 398 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 SRRM1Q8IYB3 904 aaKnown RBP3□□□□□ -1.93
DDX46-209ENST00000509255 CISD2Q8N5K1 135 aaKnown RBP3□□□□□ -1.93
DDX46-209ENST00000509255 C9orf106Q8NAJ2 232 aa3□□□□□ -1.93
DDX46-209ENST00000509255 GLB1L3Q8NCI6 653 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 PMFBP1Q8TBY8 1022 aa3□□□□□ -1.93
DDX46-209ENST00000509255 SLC9A6Q92581 669 aa3□□□□□ -1.93
DDX46-209ENST00000509255 ANKS1AQ92625 1134 aa3□□□□□ -1.93
DDX46-209ENST00000509255 ZNF669Q96BR6 464 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 FOXRED1Q96CU9 486 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 DCLRE1CQ96SD1 692 aaKnown RBP3□□□□□ -1.93
DDX46-209ENST00000509255 BUD13Q9BRD0 619 aaKnown RBP eCLIP3□□□□□ -1.932e-7■■□□□ 11.9
DDX46-209ENST00000509255 CPPED1Q9BRF8 314 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 NDC1Q9BTX1 674 aa3□□□□□ -1.93
DDX46-209ENST00000509255 POLR3BQ9NW08 1133 aaPredicted RBP3□□□□□ -1.93
DDX46-209ENST00000509255 TRPM5Q9NZQ8 1165 aa3□□□□□ -1.93
DDX46-209ENST00000509255 RNF7Q9UBF6 113 aa3□□□□□ -1.93
DDX46-209ENST00000509255 PCDHA9Q9Y5H5 950 aa3□□□□□ -1.93
DDX46-209ENST00000509255 COL3A1P02461 1466 aaPredicted RBP2.99□□□□□ -1.93
DDX46-209ENST00000509255 SLC12A8A0AV02 714 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 HOXA3O43365 443 aaPredicted RBP2.99□□□□□ -1.93
DDX46-209ENST00000509255 STC2O76061 302 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 CRTAMO95727 393 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 PRLP01236 227 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 C6orf222P0C671 652 aaPredicted RBP2.99□□□□□ -1.93
DDX46-209ENST00000509255 ATP2B1P20020 1258 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 BMPR1AP36894 532 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 RGS3P49796 1198 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 FAM189BP81408 668 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 NHLH1Q02575 133 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 VPS72Q15906 364 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 FSTL4Q6MZW2 842 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 GDF7Q7Z4P5 450 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 BMP8AQ7Z5Y6 402 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 OR52N2Q8NGI0 321 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 CAGE1Q8TC20 777 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 HNRNPLLQ8WVV9 542 aaKnown RBP2.99□□□□□ -1.93
DDX46-209ENST00000509255 DYDC2Q96IM9 177 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 IPO9Q96P70 1041 aaKnown RBP2.99□□□□□ -1.93
DDX46-209ENST00000509255 CDC6Q99741 560 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 AKIP1Q9NQ31 210 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 DKK2Q9UBU2 259 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 TLK1Q9UKI8 766 aa2.99□□□□□ -1.93
DDX46-209ENST00000509255 TRBV23-1A0A0A0MS06 115 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 PIPSLA2A3N6 862 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 ANKRD62A6NC57 917 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 DNAJC9-AS1A6NH13 148 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 NRP1O14786 923 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 NCR1O76036 304 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 RASGRP1O95267 797 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 NDUFA10O95299 355 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 ESRRBO95718 433 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 APOBEC3AP31941 199 aaPredicted RBP2.98□□□□□ -1.93
DDX46-209ENST00000509255 FNTBP49356 437 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 SLC6A3Q01959 620 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 GUCY1B3Q02153 619 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 GNL2Q13823 731 aaKnown RBP2.98□□□□□ -1.93
DDX46-209ENST00000509255 ABHD17BQ5VST6 288 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 CC2D1AQ6P1N0 951 aaPredicted RBP2.98□□□□□ -1.93
DDX46-209ENST00000509255 BRAPQ7Z569 592 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 FAM83AQ86UY5 434 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 LILRA3Q8N6C8 439 aaPredicted RBP2.98□□□□□ -1.93
DDX46-209ENST00000509255 ZNF366Q8N895 744 aa2.98□□□□□ -1.93
DDX46-209ENST00000509255 SLC43A3Q8NBI5 491 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms