RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 C8orf34Q49A92 452 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 NLRP4Q96MN2 994 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 ELAC1Q9H777 363 aaKnown RBP12.12□□□□□ -0.47
TUSC3-208ENST00000509177 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
TUSC3-208ENST00000509177 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 A0A087WZ62 844 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 IGKV6-21A0A0C4DH24 114 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 ST18O60284 1047 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 SRGAP2CP0DJJ0 459 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 FGFR1P11362 822 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 MCM7P33993 719 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 RFC5P40937 340 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 ZNF410Q86VK4 478 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 KSR1Q8IVT5 923 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 SUGP1Q8IWZ8 645 aaKnown RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 VN1R2Q8NFZ6 395 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 TMEM143Q96AN5 459 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 ASIC4Q96FT7 647 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 PRRX2Q99811 253 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 TTC12Q9H892 705 aaPredicted RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 TYW1Q9NV66 732 aaKnown RBP12.11□□□□□ -0.47
TUSC3-208ENST00000509177 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 VPS13AQ96RL7 3174 aa12.11□□□□□ -0.47
TUSC3-208ENST00000509177 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 PER2O15055 1255 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 SLITRK3O94933 977 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 TCP11Q8WWU5 503 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 PRPF31Q8WWY3 499 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 PSPC1Q8WXF1 523 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 SUSD6Q92537 303 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 RPGRIP1Q96KN7 1286 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 PHF7Q9BWX1 381 aaPredicted RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 TLE6Q9H808 572 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 FAM86C1Q9NVL1 165 aa12.1□□□□□ -0.47
TUSC3-208ENST00000509177 WRAP73Q9P2S5 460 aaPredicted RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
TUSC3-208ENST00000509177 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 ZBTB39O15060 712 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 EOMESO95936 686 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 LAG3P18627 525 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 SPIRE1Q08AE8 756 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 EMC2Q15006 297 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 RABEP1Q15276 862 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 ZNF174Q15697 407 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 KIF2CQ99661 725 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 FOXP1Q9H334 677 aaPredicted RBP12.09□□□□□ -0.47
TUSC3-208ENST00000509177 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
TUSC3-208ENST00000509177 NOL7Q9UMY1 257 aaKnown RBP12.09□□□□□ -0.47
TUSC3-208ENST00000509177 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
TUSC3-208ENST00000509177 ASAP2O43150 1006 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 GAS2O43903 313 aaKnown RBP12.08□□□□□ -0.48
TUSC3-208ENST00000509177 FGF18O76093 207 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 SKIP12755 728 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
TUSC3-208ENST00000509177 ERVFC1P60507 584 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 LAMTOR4Q0VGL1 99 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 CASD1Q96PB1 797 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 MTRQ99707 1265 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 S1PR5Q9H228 398 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
TUSC3-208ENST00000509177 DCHS1Q96JQ0 3298 aa12.08□□□□□ -0.48
TUSC3-208ENST00000509177 A0A087WWV3 80 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 POTEMA6NI47 508 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 WNT7AO00755 349 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 GFRA3O60609 400 aa12.07□□□□□ -0.48
TUSC3-208ENST00000509177 PTPRZ1P23471 2315 aaPredicted RBP12.07□□□□□ -0.48
TUSC3-208ENST00000509177 AVPR2P30518 371 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms