RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 MAEAQ7L5Y9 396 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 CDR2LQ86X02 465 aaPredicted RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 CMTR2Q8IYT2 770 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 SPPL3Q8TCT6 385 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 BCL7CQ8WUZ0 217 aaPredicted RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 CXCL16Q9H2A7 254 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 PLAGL2Q9UPG8 496 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
SNCA-211ENST00000508895 PCDHB7Q9Y5E2 793 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 COL4A3BPQ9Y5P4 624 aa9.65□□□□□ -0.86
SNCA-211ENST00000508895 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 RPLP2P05387 115 aaKnown RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 LTBRP36941 435 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 POLGP54098 1239 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 ERVFC1P60507 584 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 HYAL1Q12794 435 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 SKIV2LQ15477 1246 aaKnown RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 ARL6IP4Q66PJ3 421 aaKnown RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 AGMOQ6ZNB7 445 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 TMEM173Q86WV6 379 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 COLGALT1Q8NBJ5 622 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 RNF169Q8NCN4 708 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 NEK9Q8TD19 979 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 HELQQ8TDG4 1101 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
SNCA-211ENST00000508895 CPB2Q96IY4 423 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 PNMA5Q96PV4 448 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 ASB2Q96Q27 587 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 POLR3FQ9H1D9 316 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 CD320Q9NPF0 282 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 C1orf112Q9NSG2 853 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 TMEM161AQ9NX61 479 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 THEGQ9P2T0 379 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 MORC2Q9Y6X9 1032 aaPredicted RBP9.64□□□□□ -0.87
SNCA-211ENST00000508895 C5orf42Q9H799 3197 aa9.64□□□□□ -0.87
SNCA-211ENST00000508895 A0A0U1RQF3 1178 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 VWA3AA6NCI4 1184 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 NT5C1B-RDH14C9J2C7 533 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 E9PMD0 336 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 GTPBP6O43824 516 aaPredicted RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 TSPAN1O60635 241 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 BMP15O95972 392 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 STAG3L1P0CL83 205 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 RFC5P40937 340 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 PHKA2P46019 1235 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 PTENP60484 403 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 CEBPZQ03701 1054 aaKnown RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 DNM1Q05193 864 aaKnown RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 MBTD1Q05BQ5 628 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 ZNF410Q86VK4 478 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 DAW1Q8N136 415 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 RNF149Q8NC42 400 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 SMG8Q8ND04 991 aaKnown RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 VN1R2Q8NFZ6 395 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 PSPC1Q8WXF1 523 aaKnown RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 MTRQ99707 1265 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 UBE2ZQ9H832 354 aaPredicted RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 ATP6V0A4Q9HBG4 840 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 LRFN2Q9ULH4 789 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 PIN4Q9Y237 131 aaKnown RBP9.63□□□□□ -0.87
SNCA-211ENST00000508895 HES2Q9Y543 173 aa9.63□□□□□ -0.87
SNCA-211ENST00000508895 DOCK6Q96HP0 2047 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 F8W810 466 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 H3BQ06 376 aaPredicted RBP9.62□□□□□ -0.87
SNCA-211ENST00000508895 OFD1O75665 1012 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 YEATS4O95619 227 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 GLP2RO95838 553 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 RPA1P27694 616 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 MARCKSP29966 332 aaPredicted RBP9.62□□□□□ -0.87
SNCA-211ENST00000508895 DNM2P50570 870 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 MRPS5P82675 430 aaKnown RBP9.62□□□□□ -0.87
SNCA-211ENST00000508895 COL19A1Q14993 1142 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 HAUS3Q68CZ6 603 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 DTHD1Q6ZMT9 781 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 CATSPER4Q7RTX7 472 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 ZNF280BQ86YH2 543 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 LINC00301Q8NCQ3 95 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 SNX29Q8TEQ0 813 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 POF1BQ8WVV4 589 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 SLC7A3Q8WY07 619 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 SAMD11Q96NU1 681 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 PLIN2Q99541 437 aa9.62□□□□□ -0.87
SNCA-211ENST00000508895 VN1R3Q9BXE9 311 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms