RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 PLPP4Q5VZY2 271 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 GLB1LQ6UWU2 654 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 LRRC55Q6ZSA7 311 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 C4orf19Q8IY42 314 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 DYDC2Q96IM9 177 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 CDCA3Q99618 268 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 TCF25Q9BQ70 676 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 NGRNQ9NPE2 291 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 WDR81Q562E7 1941 aa11.27□□□□□ -0.61
UBE2D3-227ENST00000508818 CARNS1A5YM72 827 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 DCXO43602 365 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 GAS2O43903 313 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 NEMFO60524 1076 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 JAK2O60674 1132 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 GPR37L1O60883 481 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 LARGE1O95461 756 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 RNASELQ05823 741 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 ZP2Q05996 745 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 LAMTOR4Q0VGL1 99 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 EMC2Q15006 297 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 LONRF3Q496Y0 759 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 CLLU1OSQ5K130 101 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 RSPH1Q8WYR4 309 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■■□□ 17.8
UBE2D3-227ENST00000508818 TMEM169Q96HH4 297 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 TTC12Q9H892 705 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM105AQ9NUU6 356 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 INPP5FQ9Y2H2 1132 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 HCN4Q9Y3Q4 1203 aa11.26□□□□□ -0.61
UBE2D3-227ENST00000508818 FNDC1Q4ZHG4 1894 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM86C2PA6NEL3 165 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 SLITRK3O94933 977 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 PBX3P40426 434 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 COASYQ13057 564 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 TFDP1Q14186 410 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 MXD4Q14582 209 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 DUSP6Q16828 381 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 RNF149Q8NC42 400 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 URGCPQ8TCY9 931 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 LPPQ93052 612 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM193BQ96PV7 902 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 MTRQ99707 1265 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 EIF2AK1Q9BQI3 630 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 TRAIPQ9BWF2 469 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 DHX33Q9H6R0 707 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 CLEC1BQ9P126 229 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 WRAP73Q9P2S5 460 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 RAPGEFL1Q9UHV5 662 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 PCDHB2Q9Y5E7 798 aa11.25□□□□□ -0.61
UBE2D3-227ENST00000508818 KIAA1671Q9BY89 1806 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 FSCN2O14926 492 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ZBTB39O15060 712 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 MAP3K13O43283 966 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ZNF623O75123 536 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ZC3H11AO75152 810 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ERLIN2O94905 339 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 SEC24BO95487 1268 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 EYA4O95677 639 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 CXCL14O95715 111 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 C7P10643 843 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 TECP42680 631 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 BCAR1P56945 870 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 LLGL2Q6P1M3 1020 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 FERMT3Q86UX7 667 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 SLC39A11Q8N1S5 342 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 FAM122AQ96E09 287 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 MSLNLQ96KJ4 702 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
UBE2D3-227ENST00000508818 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms