RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ITIH2P19823 946 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ATP2B1P20020 1258 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 KIF5BP33176 963 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLC1A4P43007 532 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 HMGCS2P54868 508 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ANTXR2P58335 489 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 KIF23Q02241 960 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 MAP2K1Q02750 393 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CCL15Q16663 113 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ASPRV1Q53RT3 343 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLFN13Q68D06 897 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CYP4F22Q6NT55 531 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 LBX2Q6XYB7 198 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 Q6ZUG5 572 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 FAM160B2Q86V87 743 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 REXO1Q8N1G1 1221 aaKnown RBP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ACER1Q8TDN7 264 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 CHURC1Q8WUH1 139 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZNF274Q96GC6 653 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 LZTS2Q9BRK4 669 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 LY9Q9HBG7 655 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 PDRG1Q9NUG6 133 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 KLHL3Q9UH77 587 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 FEM1BQ9UK73 627 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 TAF6LQ9Y6J9 622 aa6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 OAS3Q9Y6K5 1087 aaKnown RBP6.36□□□□□ -1.39
HMGB1P44-201ENST00000508597 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 WASH4PA8MWX3 477 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 NMT2O60551 498 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 NDUFB10O96000 172 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 PARP1P09874 1014 aaKnown RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 VCAM1P19320 739 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 GCLCP48506 637 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 NASPP49321 788 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 NEK4P51957 841 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 STAT2P52630 851 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 IRX3P78415 501 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 TROAPQ12815 778 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 TRAF1Q13077 416 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 MOGSQ13724 837 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 COG2Q14746 738 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 BTNL9Q6UXG8 535 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 GADL1Q6ZQY3 521 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 CATSPERGQ6ZRH7 1159 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 SPACA3Q8IXA5 215 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 MB21D1Q8N884 522 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 MFSD2AQ8NA29 543 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 PRPF38AQ8NAV1 312 aaKnown RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 BAHD1Q8TBE0 780 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 BCL7CQ8WUZ0 217 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 BRI3BPQ8WY22 251 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 KIF2CQ99661 725 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 MAF1Q9H063 256 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 RBM28Q9NW13 759 aaKnown RBP6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 SAGE1Q9NXZ1 904 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 THSD7BQ9C0I4 1608 aa6.35□□□□□ -1.39
HMGB1P44-201ENST00000508597 NID2Q14112 1375 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 BTBD19C9JJ37 291 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 PDHXO00330 501 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZBTB43O43298 467 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 DHX16O60231 1041 aaKnown RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 LRRN2O75325 713 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 PRNPP04156 253 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 PDHBP11177 359 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 COPB2P35606 906 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZNF165P49910 485 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 OAZ1P54368 228 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 ZNF543Q08ER8 600 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 GRM4Q14833 912 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 SHROOM1Q2M3G4 852 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 CPLX2Q6PUV4 134 aaKnown RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 APOA5Q6Q788 366 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 GK5Q6ZS86 529 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 CHST3Q7LGC8 479 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 LRRC47Q8N1G4 583 aaKnown RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 DNAJC5GQ8N7S2 189 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 FANCBQ8NB91 859 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 NETO1Q8TDF5 533 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 BRF1Q92994 677 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 PTPN18Q99952 460 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 UPF3BQ9BZI7 483 aaKnown RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 RPAP3Q9H6T3 665 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 ADAMTS5Q9UNA0 930 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 LIMCH1Q9UPQ0 1083 aa6.34□□□□□ -1.39
HMGB1P44-201ENST00000508597 BAZ2BQ9UIF8 2168 aaKnown RBP6.34□□□□□ -1.4
HMGB1P44-201ENST00000508597 MYH6P13533 1939 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 KLF18A0A0U1RQI7 1052 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TMEM232C9JQI7 657 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 KLRF2D3W0D1 207 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms