RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 ZC2HC1CQ53FD0 456 aaPredicted RBP12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 ZNF720Q7Z2F6 126 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 LINC01465Q8N7H1 131 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 HVCN1Q96D96 273 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 TRPV2Q9Y5S1 764 aa12.13□□□□□ -0.47
BRCC3P1-201ENST00000508559 UBE4BO95155 1302 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 ERLIN2O94905 339 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRKCBP05771 671 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 COL6A1P12109 1028 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRCPP42785 496 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 PTENP60484 403 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 TLE2Q04725 743 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 POU5F1BQ06416 359 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 PAK1Q13153 545 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 DPCR1Q3MIW9 517 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 SRGAP1Q7Z6B7 1085 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 KIAA0895Q8NCT3 520 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 OSMRQ99650 979 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 CELF4Q9BZC1 486 aaKnown RBP12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 TMEM206Q9H813 350 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 TBX20Q9UMR3 447 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 CDY2AQ9Y6F7 541 aa12.12□□□□□ -0.47
BRCC3P1-201ENST00000508559 EVPLQ92817 2033 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 MYH11P35749 1972 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 BECN2A8MW95 431 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 CALUO43852 315 aaPredicted RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 CAND2O75155 1236 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 CAVIN2O95810 425 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 SFPQP23246 707 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 LIG4P49917 911 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 CASP5P51878 434 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 STX17P56962 302 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 ZNF445P59923 1031 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 TPM4P67936 248 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 EHHADHQ08426 723 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 CT47A1Q5JQC4 288 aaPredicted RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 GOLGA5Q8TBA6 731 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 TOX2Q96NM4 488 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 FGFBP2Q9BYJ0 223 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 ST6GALNAC4Q9H4F1 302 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
BRCC3P1-201ENST00000508559 SMTNL1A8MU46 457 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 GOLGA6L19H0YKK7 550 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 GPR32O75388 356 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 CSDE1O75534 798 aaKnown RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 CKBP12277 381 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 DARSP14868 501 aaKnown RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 BMP6P22004 513 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 EIF4BP23588 611 aaKnown RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 ZNF165P49910 485 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 GTF2BQ00403 316 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 LRRC26Q2I0M4 334 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 COBLL1Q53SF7 1204 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 C11orf57Q6ZUT1 292 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 APBB1IPQ7Z5R6 666 aaPredicted RBP12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 RPAINQ86UA6 219 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 SCFD1Q8WVM8 642 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 P2RX5Q93086 422 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 TCHPQ9BT92 498 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 NFKBIZQ9BYH8 718 aa12.1□□□□□ -0.47
BRCC3P1-201ENST00000508559 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms