RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 RABGGTAQ92696 567 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 NCOA5Q9HCD5 579 aaKnown RBP5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 CEP72Q9P209 647 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 SAE1Q9UBE0 346 aaPredicted RBP5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 VWA7Q9Y334 891 aa5.73□□□□□ -1.49
PDLIM5-211ENST00000508531 RGS3P49796 1198 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 KIF11P52732 1056 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 SLC6A3Q01959 620 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 DDX10Q13206 875 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 CRHR2Q13324 411 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 CNGB1Q14028 1251 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 FNDC7Q5VTL7 733 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 TAF3Q5VWG9 929 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 OTOP1Q7RTM1 612 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 THEMISQ8N1K5 641 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 MKL1Q969V6 931 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 NAP1L5Q96NT1 182 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 AURKAIP1Q9NWT8 199 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 DENND2AQ9ULE3 1009 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 SH3BP1Q9Y3L3 701 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 RBM8AQ9Y5S9 174 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 ZMYM4Q5VZL5 1548 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 PTPRKQ15262 1439 aa5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 SMG6Q86US8 1419 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-211ENST00000508531 SHANK2Q9UPX8 1470 aa5.71□□□□□ -1.49
PDLIM5-211ENST00000508531 ZMYM3Q14202 1370 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 DVL2O14641 736 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 CYP27B1O15528 508 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 H2AFYO75367 372 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 GLRX3O76003 335 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 PRLP01236 227 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 MECP2P51608 486 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ADCY7P51828 1080 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ANTXR2P58335 489 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ARHGAP44Q17R89 818 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 TMPRSS6Q8IU80 811 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 AMER2Q8N7J2 671 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ZNF483Q8TF39 744 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ANP32BQ92688 251 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 LPPQ93052 612 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 SLC7A6OSQ96CW6 309 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 TRIM44Q96DX7 344 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 RPL10LQ96L21 214 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 MPHOSPH9Q99550 1183 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 SLC6A15Q9H2J7 730 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 IKZF4Q9H2S9 585 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ZNF703Q9H7S9 590 aaPredicted RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 SAMD15Q9P1V8 674 aa5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 WDR33Q9C0J8 1336 aaKnown RBP5.71□□□□□ -1.5
PDLIM5-211ENST00000508531 ALKQ9UM73 1620 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 C2orf78A6NCI8 922 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 ADH4P08319 380 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 FNTBP49356 437 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 ROM1Q03395 351 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 DPTQ07507 201 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 RRP1BQ14684 758 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 EFCAB2Q5VUJ9 269 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 ZCCHC8Q6NZY4 707 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 DDX53Q86TM3 631 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 LILRB2Q8N423 598 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 ANKRD53Q8N9V6 530 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 GCDHQ92947 438 aaPredicted RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 E2F7Q96AV8 911 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 CLUHP3Q96NS8 147 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 CEP89Q96ST8 783 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 C11orf21Q9P2W6 132 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 REXO2Q9Y3B8 237 aaKnown RBP5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 RNF123Q5XPI4 1314 aa5.7□□□□□ -1.5
PDLIM5-211ENST00000508531 UBA6A0AVT1 1052 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 PLD2O14939 933 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 BPIFB4P59827 614 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 DGKDQ16760 1214 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 Q6ZRM9 215 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 SMAP1Q8IYB5 467 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 ANKRD35Q8N283 1001 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 CHST14Q8NCH0 376 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 GFM2Q969S9 779 aaKnown RBP5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 MAML3Q96JK9 1138 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 GPHA2Q96T91 129 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 SLC2A4RGQ9NR83 387 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 PARPBPQ9NWS1 579 aa5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.69□□□□□ -1.5
PDLIM5-211ENST00000508531 CCNB3Q8WWL7 1395 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 GOLGA8BA8MQT2 603 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 MAKP20794 623 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 IGFALSP35858 605 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 SCNN1GP51170 649 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 ADAM8P78325 824 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 TCIRG1Q13488 830 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 SOGA3Q5TF21 947 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 PRAMEF9Q5VWM5 478 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 SLFN12LQ6IEE8 588 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 GAREM2Q75VX8 874 aa5.68□□□□□ -1.5
PDLIM5-211ENST00000508531 LARP4BQ92615 738 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms