RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 UBXN11Q5T124 520 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 ADHFE1Q8IWW8 467 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 SLC39A11Q8N1S5 342 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 PPP2R3CQ969Q6 453 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 ZNF558Q96NG5 402 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 SPG21Q9NZD8 308 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 PRKAG3Q9UGI9 489 aa16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 BARX2Q9UMQ3 279 aaPredicted RBP16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 PIN4Q9Y237 131 aaKnown RBP16.08■□□□□ 0.16
CDC42SE2-209ENST00000506419 ATG2AQ2TAZ0 1938 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 ASAP2O43150 1006 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 BCAR1P56945 870 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 COASYQ13057 564 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 SMAD4Q13485 552 aaKnown RBP16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 KCNC3Q14003 757 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 TRIM29Q14134 588 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 EMC2Q15006 297 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 DUSP6Q16828 381 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 PLPP4Q5VZY2 271 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 MRPL10Q7Z7H8 261 aaKnown RBP16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 FERMT3Q86UX7 667 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 EXOC8Q8IYI6 725 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 PSPC1Q8WXF1 523 aaKnown RBP16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 FAM50BQ9Y247 325 aa16.07■□□□□ 0.16
CDC42SE2-209ENST00000506419 KIAA1671Q9BY89 1806 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 NEMFO60524 1076 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 GPR37L1O60883 481 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 CENPBP07199 599 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 ARL2P36404 184 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 PDE12Q6L8Q7 609 aaKnown RBP16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 AGMOQ6ZNB7 445 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 TMEM173Q86WV6 379 aaPredicted RBP16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 PIGOQ8TEQ8 1089 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 TCF25Q9BQ70 676 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 LLPHQ9BRT6 129 aaKnown RBP16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 NRDE2Q9H7Z3 1164 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 ANKEF1Q9NU02 776 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
CDC42SE2-209ENST00000506419 B4GALT3O60512 393 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 GALTP07902 379 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 SKIP12755 728 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 MCM7P33993 719 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 PTENP60484 403 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 KRT17Q04695 432 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 ZNF174Q15697 407 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 TMEM31Q5JXX7 168 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 TMEM184AQ6ZMB5 413 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 TMC7Q7Z402 723 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 ZNF280BQ86YH2 543 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 MRPL43Q8N983 215 aaKnown RBP16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 SMRP1Q8NCR6 262 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 BCL7CQ8WUZ0 217 aaPredicted RBP16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 MTRQ99707 1265 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 S1PR5Q9H228 398 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 NGRNQ9NPE2 291 aaKnown RBP16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
CDC42SE2-209ENST00000506419 POTEMA6NI47 508 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 GAS2O43903 313 aaKnown RBP16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 MED24O75448 989 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 XRCC6P12956 609 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 RARRES1P49788 294 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 CATSPER3Q86XQ3 398 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 C4orf32Q8N8J7 132 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
CDC42SE2-209ENST00000506419 PLXNA4Q9HCM2 1894 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 C2orf71A6NGG8 1288 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 DDHD2O94830 711 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 CXCL14O95715 111 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 GLRA2P23416 452 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 PPM1AP35813 382 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 TECP42680 631 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 AMHR2Q16671 573 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 SYCE2Q6PIF2 218 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 EIF2AQ9BY44 585 aaKnown RBP16.03■□□□□ 0.16
CDC42SE2-209ENST00000506419 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms