RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PNMA8AQ86V59 439 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 OR14K1Q8NGZ2 314 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 JADE3Q92613 823 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 OR10A2Q9H208 303 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 PARD6AQ9NPB6 346 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 NR2E1Q9Y466 385 aa5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 CTDP1Q9Y5B0 961 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-204ENST00000505804 GAAP10253 952 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 AGXTP21549 392 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 CNR2P34972 360 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 PPP2CBP62714 309 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 PPP2CAP67775 309 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 ODR4Q5SWX8 454 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 CLEC14AQ86T13 490 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 ZBTB46Q86UZ6 589 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 PLA2G15Q8NCC3 412 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 PIK3C3Q8NEB9 887 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 GCDHQ92947 438 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 CHMP4CQ96CF2 233 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 UIMC1Q96RL1 719 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 ACE2Q9BYF1 805 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC13A1Q9BZW2 595 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 ADAM7Q9H2U9 754 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 AASDHPPTQ9NRN7 309 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 THRAP3Q9Y2W1 955 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 MRFAP1Q9Y605 127 aa5.42□□□□□ -1.54
TOPBP1-204ENST00000505804 ARHGAP6O43182 974 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 S100BP04271 92 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 ADCY7P51828 1080 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC5A3P53794 718 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 ZNF568Q3ZCX4 644 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 ARHGEF18Q6ZSZ5 1173 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 GLB1L2Q8IW92 636 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 RAVER1Q8IY67 606 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 FATE1Q969F0 183 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 PTPN18Q99952 460 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 JADE2Q9NQC1 790 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 ZNF277Q9NRM2 450 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC4A7Q9Y6M7 1214 aa5.41□□□□□ -1.54
TOPBP1-204ENST00000505804 A0A1W2PR48 441 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 PRICKLE3O43900 615 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 KIR2DL3P43628 341 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 BPIFB4P59827 614 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 HGFACQ04756 655 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 MCL1Q07820 350 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 TCIRG1Q13488 830 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 NFYCQ13952 458 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 UBE3CQ15386 1083 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 ADRM1Q16186 407 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 ANO4Q32M45 955 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 EFCAB2Q5VUJ9 269 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 MBNL2Q5VZF2 373 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 BTNL9Q6UXG8 535 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 ABHD15Q6UXT9 468 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 FRMD5Q7Z6J6 570 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 PLEKHH3Q7Z736 793 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 ANKRD53Q8N9V6 530 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 GLB1L3Q8NCI6 653 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 LPPQ93052 612 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC7A6OSQ96CW6 309 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 HOOK2Q96ED9 719 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 NEIL1Q96FI4 390 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 TEKT5Q96M29 485 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 SLC6A15Q9H2J7 730 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 ING3Q9NXR8 418 aa5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 LUC7L2Q9Y383 392 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-204ENST00000505804 MATN2O00339 956 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 TMEM127O75204 238 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 NDUFS2O75306 463 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 GSPT1P15170 499 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 C5AR1P21730 350 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 RECQLP46063 649 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 RAB27AP51159 221 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 RAC3P60763 192 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 KRT85P78386 507 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 MUM1L1Q5H9M0 696 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 UBXN11Q5T124 520 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 SPOCD1Q6ZMY3 1216 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 TAS1R1Q7RTX1 841 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 UNC5BQ8IZJ1 945 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 MSL3Q8N5Y2 521 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 JDP2Q8WYK2 163 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 RIN2Q8WYP3 895 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 CFHR4Q92496 578 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 LRRC37BQ96QE4 947 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 LMF1Q96S06 567 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 IP6K2Q9UHH9 426 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 PUF60Q9UHX1 559 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 SCOCQ9UIL1 159 aa5.39□□□□□ -1.55
TOPBP1-204ENST00000505804 TUBD1Q9UJT1 453 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms