RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 C21orf2O43822 256 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 KRT13P13646 458 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 CACNB3P54284 484 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 DENND2CQ68D51 928 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 C1orf186Q6ZWK4 172 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 HOOK3Q86VS8 718 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 ELAC2Q9BQ52 826 aaKnown RBP12.85□□□□□ -0.35
UBE3D-206ENST00000505226 WRAP73Q9P2S5 460 aaPredicted RBP12.85□□□□□ -0.35
UBE3D-206ENST00000505226 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
UBE3D-206ENST00000505226 TBX3O15119 743 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 SLITRK3O94933 977 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 SREBF1P36956 1147 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 IFNAR2P48551 515 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 DLG4P78352 724 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ACCSLQ4AC99 568 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 HIBCHQ6NVY1 386 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 APEX2Q9UBZ4 518 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ODF2LQ9ULJ1 636 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 FAM187AA6NFU0 413 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 TMEM110-MUSTN1A8MSY1 372 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ASAP2O43150 1006 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 CREB1P16220 341 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 TNFAIP8L3Q5GJ75 292 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ZNF746Q6NUN9 644 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 TP73O15350 636 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ATP6V1G2O95670 118 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ELF1P32519 619 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 PEX5P50542 639 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 DHX34Q14147 1143 aaKnown RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 PPP1R7Q15435 360 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 CERKQ8TCT0 537 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-206ENST00000505226 ACP6Q9NPH0 428 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
UBE3D-206ENST00000505226 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 RGS16O15492 202 aaPredicted RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 PHF2O75151 1096 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 FTLP02792 175 aaPredicted RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 PYGMP11217 842 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 CTNNA2P26232 953 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 KCNJ1P48048 391 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 KIF22Q14807 665 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 LLGL1Q15334 1064 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 ZNF720Q7Z2F6 126 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 MAGEC3Q8TD91 643 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 BTAF1O14981 1849 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 IGLV3-22A0A075B6J6 115 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 TISP43B9A030 160 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 RIPK2O43353 540 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 CHMP2AO43633 222 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 SCP2P22307 547 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 HOOK2Q96ED9 719 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 AGPAT1Q99943 283 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 GLT8D2Q9H1C3 349 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
UBE3D-206ENST00000505226 PTPN22Q9Y2R2 807 aa12.83□□□□□ -0.36
UBE3D-206ENST00000505226 FAM13AO94988 1023 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 CIITAP33076 1130 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 KIRREL3Q8IZU9 778 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 GIMAP7Q8NHV1 300 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 P3H4Q92791 437 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 KAT5Q92993 513 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 TBC1D31Q96DN5 1066 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 PCDHB18PQ96TA0 734 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 PCYOX1Q9UHG3 505 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 EIF3DO15371 548 aaKnown RBP eCLIP12.82□□□□□ -0.36
UBE3D-206ENST00000505226 ALAS1P13196 640 aa12.82□□□□□ -0.36
UBE3D-206ENST00000505226 COMTP21964 271 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms