RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 AKAP3O75969 853 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 PGK1P00558 417 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 NR3C1P04150 777 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 SMIM10L2AP0DMW4 78 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 SMIM10L2BP0DMW5 78 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 NR2F2P24468 414 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 HOXD10P28358 340 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 UBASH3AP57075 661 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 TPM4P67936 248 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
TPM3-217ENST00000504663 SPAG1Q07617 926 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 LAMTOR4Q0VGL1 99 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 PPFIA1Q13136 1202 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 TBX2Q13207 712 aaPredicted RBP11.42□□□□□ -0.58
TPM3-217ENST00000504663 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 RUFY4Q6ZNE9 571 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 FILIP1Q7Z7B0 1213 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 TRIM59Q8IWR1 403 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 SLC17A8Q8NDX2 589 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 CBWD1Q9BRT8 395 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 KMT5AQ9NQR1 393 aa11.42□□□□□ -0.58
TPM3-217ENST00000504663 DDX20Q9UHI6 824 aaKnown RBP11.42□□□□□ -0.58
TPM3-217ENST00000504663 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 SLC16A3O15427 465 aaKnown RBP11.41□□□□□ -0.58
TPM3-217ENST00000504663 CALUO43852 315 aaPredicted RBP11.41□□□□□ -0.58
TPM3-217ENST00000504663 MSCO60682 206 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 KIF20AO95235 890 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 MYL3P08590 195 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 KLRC1P26715 233 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 IGBP1P78318 339 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
TPM3-217ENST00000504663 AMHR2Q16671 573 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 DPY19L2P1Q6NXN4 242 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 EFCAB12Q6NXP0 572 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 KIAA0319LQ8IZA0 1049 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 FBXL18Q96ME1 805 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 TSG101Q99816 390 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 AP5M1Q9H0R1 490 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 TMEM206Q9H813 350 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 MINDY3Q9H8M7 445 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 IFT122Q9HBG6 1241 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 SUCLA2Q9P2R7 463 aaPredicted RBP11.41□□□□□ -0.58
TPM3-217ENST00000504663 USP20Q9Y2K6 914 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 STYXL1Q9Y6J8 313 aa11.41□□□□□ -0.58
TPM3-217ENST00000504663 MAGEB2O15479 319 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 FAM189A1O60320 539 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 SERPINC1P01008 464 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 ADRB2P07550 413 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 C6orf222P0C671 652 aaPredicted RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 RARBP10826 455 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 PTENP60484 403 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 ZNF200P98182 395 aaPredicted RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 MBTD1Q05BQ5 628 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 ADAM9Q13443 819 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 MYBPC2Q14324 1141 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 TPD52L1Q16890 204 aaPredicted RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 C1orf220Q5T0J3 134 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 CEP135Q66GS9 1140 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 STXBP4Q6ZWJ1 553 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 EXOC8Q8IYI6 725 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 RAET1EQ8TD07 263 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 TCP11Q8WWU5 503 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 PSPC1Q8WXF1 523 aaKnown RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 IFT74Q96LB3 600 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 TUBGCP2Q9BSJ2 902 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.58
TPM3-217ENST00000504663 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 FZD8Q9H461 694 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 XPNPEP3Q9NQH7 507 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 HDAC6Q9UBN7 1215 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 TRIM17Q9Y577 477 aa11.4□□□□□ -0.58
TPM3-217ENST00000504663 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.59
TPM3-217ENST00000504663 ITIH6Q6UXX5 1313 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 RRN3P2A6NIE6 340 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 LRRIQ4A6NIV6 560 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 GPR32O75388 356 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 PROZP22891 400 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 GRK4P32298 578 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 GPC3P51654 580 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SMTNP53814 917 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SNRPFP62306 86 aaKnown RBP11.39□□□□□ -0.59
TPM3-217ENST00000504663 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
TPM3-217ENST00000504663 ARID5BQ14865 1188 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 PPP2R5AQ15172 486 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 MAN2A1Q16706 1144 aa11.39□□□□□ -0.59
TPM3-217ENST00000504663 SMYD5Q6GMV2 418 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms