RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 LRRC27Q9C0I9 530 aa14.65□□□□□ -0.06
PDLIM7-212ENST00000504380 PARVGQ9HBI0 331 aa14.65□□□□□ -0.06
PDLIM7-212ENST00000504380 KMT5AQ9NQR1 393 aa14.65□□□□□ -0.06
PDLIM7-212ENST00000504380 INO80B-WBP1J3KQ70 363 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 KLRC4O43908 158 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 RPS6KA5O75582 802 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 PHKA2P46019 1235 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 ZNF131P52739 623 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 MBTD1Q05BQ5 628 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 DPYDQ12882 1025 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 COASYQ13057 564 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 DMP1Q13316 513 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 POSTNQ15063 836 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 PPP2R5AQ15172 486 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 HERC4Q5GLZ8 1057 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 TSHZ1Q6ZSZ6 1077 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 CCDC65Q8IXS2 484 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 GLIS3Q8NEA6 775 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 FIZ1Q96SL8 496 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 INO80BQ9C086 356 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 ERVK-5Q9HDB9 667 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 IL23AQ9NPF7 189 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 PADI3Q9ULW8 664 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 ST3GAL5Q9UNP4 418 aa14.64□□□□□ -0.07
PDLIM7-212ENST00000504380 FRMD3A2A2Y4 597 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 TTLL13PA6NNM8 815 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 K7ENM7 598 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 B4GALT5O43286 388 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 TRAK2O60296 914 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CXCL10P02778 98 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 EDN1P05305 212 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 IBSPP21815 317 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CDC42EP1Q00587 391 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 PAK2Q13177 524 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 PPIGQ13427 754 aaKnown RBP eCLIP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 KMT5BQ4FZB7 885 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 ZC2HC1CQ53FD0 456 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 PLEKHG4Q58EX7 1191 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CDCA2Q69YH5 1023 aaPredicted RBP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CNNM4Q6P4Q7 775 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 ZNF365Q70YC5 407 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 TAS1R3Q7RTX0 852 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CATSPER4Q7RTX7 472 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 SRGAP1Q7Z6B7 1085 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 CPB2Q96IY4 423 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 IFIH1Q9BYX4 1025 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 TMX1Q9H3N1 280 aa14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 LARSQ9P2J5 1176 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-212ENST00000504380 MGEA5O60502 916 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 RPN1P04843 607 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 PRKCBP05771 671 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 MYBP10242 640 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 GAP43P17677 238 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 RFC2P35250 354 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 CASP5P51878 434 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 NCKAP1LP55160 1127 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 POU5F1BQ06416 359 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 AMHR2Q16671 573 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 TMEM240Q5SV17 173 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 KANK3Q6NY19 840 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 HAUS6Q7Z4H7 955 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 CDR2LQ86X02 465 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 ZBTB8OSQ8IWT0 167 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 FAM178BQ8IXR5 827 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 TMEM161BQ8NDZ6 487 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 SPIRE2Q8WWL2 714 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 SEPT8Q92599 483 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 CCDC113Q9H0I3 377 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 IKZF4Q9H2S9 585 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 MRPL44Q9H9J2 332 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 C17orf75Q9HAS0 396 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 ARHGAP28Q9P2N2 729 aa14.62□□□□□ -0.07
PDLIM7-212ENST00000504380 DENND3A2RUS2 1198 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 K7ERI5 159 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 SOX1O00570 391 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 GPR182O15218 404 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 MAPTP10636 758 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 SMTNP53814 917 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 C9orf50Q5SZB4 431 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 GPR153Q6NV75 609 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 RTN4RL1Q86UN2 441 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 LINC01599Q8WXQ3 324 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 NTPCRQ9BSD7 190 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 C2orf40Q9H1Z8 148 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 FZD8Q9H461 694 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 CLSTN2Q9H4D0 955 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 SLC39A2Q9NP94 309 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 EXOC1Q9NV70 894 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 PCDHA5Q9Y5H7 936 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 SQORQ9Y6N5 450 aa14.61□□□□□ -0.07
PDLIM7-212ENST00000504380 PVALEFA0A1B0GWK0 134 aa14.6□□□□□ -0.07
PDLIM7-212ENST00000504380 TSPAN1O60635 241 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms