RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF70Q9UC06 446 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 EIF2B4Q9UI10 523 aaKnown RBP3.28□□□□□ -1.88
HMGB3P17-201ENST00000504195 GOLGA6L22H0YM25 854 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZNF561-AS1K7EIQ3 104 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 FOXP2O15409 715 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 KRT15P19012 456 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 SDHAP31040 664 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 CCKBRP32239 447 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 JAM2P57087 298 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 SRSF4Q08170 494 aaKnown RBP3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 ACAP1Q15027 740 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 DGKDQ16760 1214 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 ABHD17BQ5VST6 288 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 MTDHQ86UE4 582 aaKnown RBP3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 GLB1L3Q8NCI6 653 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 TINF2Q9BSI4 451 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 VPS33BQ9H267 617 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 KIAA1586Q9HCI6 787 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 ANKFY1Q9P2R3 1169 aa3.27□□□□□ -1.89
HMGB3P17-201ENST00000504195 PIPSLA2A3N6 862 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 DIRC3C9JPN6 131 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 MTSS1O43312 755 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 KLF4O43474 513 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 TOX4O94842 621 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 IGLV2-14P01704 120 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 PYGMP11217 842 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 HK1P19367 917 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZFP36P26651 326 aaKnown RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 ALDH6A1Q02252 535 aaKnown RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 KRTAP27-1Q3LI81 207 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 YOD1Q5VVQ6 348 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 CLEC14AQ86T13 490 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 PCDH19Q8TAB3 1148 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 NKD2Q969F2 451 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZNF669Q96BR6 464 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 IPO9Q96P70 1041 aaKnown RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 FOXB1Q99853 325 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 DUSP26Q9BV47 211 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 TRIM55Q9BYV6 548 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 C14orf93Q9H972 538 aaKnown RBP3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 CLCA2Q9UQC9 943 aa3.26□□□□□ -1.89
HMGB3P17-201ENST00000504195 AHRRA9YTQ3 701 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 LPXNO60711 386 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 ESRRBO95718 433 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 APPP05067 770 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 HLA-DOAP06340 250 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 KIR2DL3P43628 341 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 RAB33AQ14088 237 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 RUSC1-AS1Q66K80 236 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZNF425Q6IV72 752 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 FAM83AQ86UY5 434 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 HOMEZQ8IX15 550 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 SLC43A3Q8NBI5 491 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 PTPRN2Q92932 1015 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 CDC6Q99741 560 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 NDC1Q9BTX1 674 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 SPATA9Q9BWV2 254 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 DKK2Q9UBU2 259 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 CBLCQ9ULV8 474 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 TRAF6Q9Y4K3 522 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 ASXL2Q76L83 1435 aa3.25□□□□□ -1.89
HMGB3P17-201ENST00000504195 WDR91A4D1P6 747 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 ERVV-2B6SEH9 535 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 ARVCFO00192 962 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 PROP1O75360 226 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 PLA2G5P39877 138 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 SUMO1P63165 101 aaKnown RBP3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 GUCY1A3Q02108 690 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 GUCY1B3Q02153 619 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 FOXI1Q12951 378 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 MPP3Q13368 585 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 VPS72Q15906 364 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 KIAA1614Q5VZ46 1190 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 GDF7Q7Z4P5 450 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 PLXDC1Q8IUK5 500 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 OR5AN1Q8NGI8 311 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 WDR92Q96MX6 357 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 GMLQ99445 158 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 CPPED1Q9BRF8 314 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 ZNF768Q9H5H4 540 aaKnown RBP3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 SMURF1Q9HCE7 757 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 AKIP1Q9NQ31 210 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 KCMF1Q9P0J7 381 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 NCDNQ9UBB6 729 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 PCDHA8Q9Y5H6 950 aa3.24□□□□□ -1.89
HMGB3P17-201ENST00000504195 TRBV23-1A0A0A0MS06 115 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 CCDC66A2RUB6 948 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 SCDO00767 359 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 NRP1O14786 923 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 MAFGO15525 162 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 SRGAP2CP0DJJ0 459 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 KRT10P13645 584 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 TKTP29401 623 aaKnown RBP3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 ROM1Q03395 351 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 BEAN1Q3B7T3 259 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 ARMC6Q6NXE6 501 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 BRAPQ7Z569 592 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 ARHGEF25Q86VW2 580 aa3.23□□□□□ -1.89
HMGB3P17-201ENST00000504195 NOSTRINQ8IVI9 506 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms