RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 ZSWIM8A7E2V4 1837 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 CCL15-CCL14A0A0B4J2E2 113 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 A0A1B0GUL7 405 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 RBP3P10745 1247 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 CDC25BP30305 580 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 SARSP49591 514 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 TCP10Q12799 353 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 TFCP2Q12800 502 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 NFIAQ12857 509 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 CCL15Q16663 113 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 NOL9Q5SY16 702 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 GTF2IRD2BQ6EKJ0 949 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 GTF2IRD2Q86UP8 949 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 CMTR2Q8IYT2 770 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 FAM43AQ8N2R8 423 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 ERO1AQ96HE7 468 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 THG1LQ9NWX6 298 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 FRRS1LQ9P0K9 344 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 DDX20Q9UHI6 824 aaKnown RBP8.37□□□□□ -1.07
PTCD2-206ENST00000503315 SLC6A14Q9UN76 642 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 INVSQ9Y283 1065 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 HIF3AQ9Y2N7 669 aa8.37□□□□□ -1.07
PTCD2-206ENST00000503315 DOCK3Q8IZD9 2030 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 PDS5AQ29RF7 1337 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 PNMA6EA0A0J9YXQ4 647 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 BTBD19C9JJ37 291 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 F5H423 210 aaPredicted RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 FANCGO15287 622 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 GDF9O60383 454 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 CTNND1O60716 968 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 GRIK1P39086 918 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 CCT5P48643 541 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 RNF4P78317 190 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 PPATQ06203 517 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 ZC3H12AQ5D1E8 599 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 MMS22LQ6ZRQ5 1243 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 ZC3H7AQ8IWR0 971 aaKnown RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 ZFPM1Q8IX07 1006 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 ARHGEF39Q8N4T4 335 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 CD99L2Q8TCZ2 262 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 IDI2Q9BXS1 227 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 ZNF341Q9BYN7 854 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 FAM204AQ9H8W3 233 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 CYP26B1Q9NR63 512 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 USP40Q9NVE5 1235 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 CGGBP1Q9UFW8 167 aaPredicted RBP8.36□□□□□ -1.07
PTCD2-206ENST00000503315 PTPN22Q9Y2R2 807 aa8.36□□□□□ -1.07
PTCD2-206ENST00000503315 GAKO14976 1311 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 CFAP69A5D8W1 941 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 TLR2O60603 784 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 SIN3BO75182 1162 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 ECEL1O95672 775 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 GNAI2P04899 355 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 LDHCP07864 332 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 THBS1P07996 1170 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 CETPP11597 493 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 ERVK-24P63145 666 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 PPIL2Q13356 520 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 NTRK3Q16288 839 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 IGSF22Q8N9C0 903 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 TMEM145Q8NBT3 493 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 KCT2Q8NC54 265 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
PTCD2-206ENST00000503315 CYB5D2Q8WUJ1 264 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 GP6Q9HCN6 339 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 ZCCHC17Q9NP64 241 aaKnown RBP8.35□□□□□ -1.07
PTCD2-206ENST00000503315 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 C14orf119Q9NWQ9 140 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 ABCF2Q9UG63 623 aa8.35□□□□□ -1.07
PTCD2-206ENST00000503315 GDF2Q9UK05 429 aaPredicted RBP8.35□□□□□ -1.07
PTCD2-206ENST00000503315 FOCADQ5VW36 1801 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 KIAA0100Q14667 2235 aaKnown RBP8.34□□□□□ -1.07
PTCD2-206ENST00000503315 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 PDE4DIPQ5VU43 2346 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 ABHD14A-ACY1A0A1B0GW23 586 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 ENTPD3O75355 529 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 OFD1O75665 1012 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 TYRP1P17643 537 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 ECI1P42126 302 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.07
PTCD2-206ENST00000503315 SNAPC2Q13487 334 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 MVPQ14764 893 aaKnown RBP8.34□□□□□ -1.07
PTCD2-206ENST00000503315 CLUL1Q15846 466 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 PDCD2Q16342 344 aaPredicted RBP8.34□□□□□ -1.07
PTCD2-206ENST00000503315 LONRF1Q17RB8 773 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 PPM1JQ5JR12 505 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 ZKSCAN2Q63HK3 967 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 SRGAP1Q7Z6B7 1085 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 TMEM57Q8N5G2 664 aa8.34□□□□□ -1.07
PTCD2-206ENST00000503315 PPHLN1Q8NEY8 458 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms