RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 PCIF1Q9H4Z3 704 aa24.02■■□□□ 1.44
PTPN13-205ENST00000502971 NLRC4Q9NPP4 1024 aa24.02■■□□□ 1.44
PTPN13-205ENST00000502971 RBM47A0AV96 593 aaKnown RBP24.01■■□□□ 1.43
PTPN13-205ENST00000502971 SLC9A1P19634 815 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 GTF2F1P35269 517 aaKnown RBP eCLIP24.01■■□□□ 1.43
PTPN13-205ENST00000502971 FMO5P49326 533 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 MCCD1P59942 119 aaPredicted RBP24.01■■□□□ 1.43
PTPN13-205ENST00000502971 GRB14Q14449 540 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 ARHGAP29Q52LW3 1261 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 KLHDC7AQ5VTJ3 777 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 ZNF662Q6ZS27 426 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 EXOC8Q8IYI6 725 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 GLG1Q92896 1179 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 LZTFL1Q9NQ48 299 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 MYO6Q9UM54 1294 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 TISP43B9A030 160 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 CNGA1P29973 690 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 NAMPTP43490 491 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 TM4SF4P48230 202 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 GNG11P61952 73 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 MAMDC4Q6UXC1 1216 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 PLEKHH3Q7Z736 793 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 PDGFCQ9NRA1 345 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 GCNT4Q9P109 453 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 ARHGAP20Q9P2F6 1191 aa24.01■■□□□ 1.43
PTPN13-205ENST00000502971 REXO2Q9Y3B8 237 aaKnown RBP24.01■■□□□ 1.43
PTPN13-205ENST00000502971 ADGRA3Q8IWK6 1321 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 SSU72P8A0A1W2PR75 194 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 KIF5CO60282 957 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 MAFO75444 373 aaPredicted RBP24■■□□□ 1.43
PTPN13-205ENST00000502971 MAPK8IP2Q13387 824 aaPredicted RBP24■■□□□ 1.43
PTPN13-205ENST00000502971 BRDTQ58F21 947 aaPredicted RBP24■■□□□ 1.43
PTPN13-205ENST00000502971 TAPT1Q6NXT6 567 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 PAXIP1Q6ZW49 1069 aaPredicted RBP24■■□□□ 1.43
PTPN13-205ENST00000502971 DPP9Q86TI2 863 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 IFNL1Q8IU54 200 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 RDH13Q8NBN7 331 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 ATP8B4Q8TF62 1192 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 TMEM143Q96AN5 459 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 SMARCAD1Q9H4L7 1026 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 AIPL1Q9NZN9 384 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 MCM3APO60318 1980 aa24■■□□□ 1.43
PTPN13-205ENST00000502971 ANKRD63C9JTQ0 380 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 N4BP1O75113 896 aaKnown RBP23.99■■□□□ 1.43
PTPN13-205ENST00000502971 UCHL3P15374 230 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 GLRA2P23416 452 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 VAMP7P51809 220 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 LAMC2Q13753 1193 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 SLC9C1Q4G0N8 1177 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 COPS5Q92905 334 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.99■■□□□ 1.43
PTPN13-205ENST00000502971 DAAM1Q9Y4D1 1078 aa23.99■■□□□ 1.43
PTPN13-205ENST00000502971 IGF2BP3O00425 579 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTPN13-205ENST00000502971 GAS2O43903 313 aaKnown RBP23.98■■□□□ 1.43
PTPN13-205ENST00000502971 LCA5LO95447 670 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 SERPING1P05155 500 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 ACTN1P12814 892 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 ADSSP30520 456 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 ARHGAP25P42331 645 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 CYP4F22Q6NT55 531 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 ASAP3Q8TDY4 903 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 HAUS4Q9H6D7 363 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 SIX2Q9NPC8 291 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 MYO1AQ9UBC5 1043 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 SLC15A5A6NIM6 579 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 P4HA2O15460 535 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 TRIM49P0CI25 452 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 TRIM49CP0CI26 452 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 GARTP22102 1010 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 CASQ1P31415 396 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 EIF4A3P38919 411 aaKnown RBP23.98■■□□□ 1.43
PTPN13-205ENST00000502971 APBA1Q02410 837 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 SPA17Q15506 151 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 DEPTORQ8TB45 409 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 DEF6Q9H4E7 631 aa23.98■■□□□ 1.43
PTPN13-205ENST00000502971 ZNF236Q9UL36 1845 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 A0A0U1RQJ8 604 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 GH1P01241 217 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 MYL7Q01449 175 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 ARHGAP1Q07960 439 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 STRN3Q13033 797 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 PLCB4Q15147 1175 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 HGSNATQ68CP4 663 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 TAS1R3Q7RTX0 852 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 TCP11Q8WWU5 503 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 ATRIPQ8WXE1 791 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 EMID1Q96A84 441 aaPredicted RBP23.97■■□□□ 1.43
PTPN13-205ENST00000502971 KATNBL1Q9H079 304 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 SLC5A4Q9NY91 659 aa23.97■■□□□ 1.43
PTPN13-205ENST00000502971 ALDH1A1P00352 501 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 PLEKP08567 350 aaPredicted RBP23.96■■□□□ 1.43
PTPN13-205ENST00000502971 KIF11P52732 1056 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 ENPEPQ07075 957 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 RAPGEF1Q13905 1077 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 CBWD6Q4V339 395 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 CBWD3Q5JTY5 395 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 CBWD5Q5RIA9 395 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 IER5Q5VY09 327 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 SLC39A4Q6P5W5 647 aa23.96■■□□□ 1.43
PTPN13-205ENST00000502971 KIAA1328Q86T90 577 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms