RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SH3BP1Q9Y3L3 701 aa3.5□□□□□ -1.85
SMAD1-203ENST00000502342 TSC22D4Q9Y3Q8 395 aa3.5□□□□□ -1.85
SMAD1-203ENST00000502342 GOLGA8AA7E2F4 631 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 MATN3O15232 486 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 ZEB2O60315 1214 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 KDM1AO60341 852 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 FSHBP01225 129 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 GAAP10253 952 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 CPEP16870 476 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 BPIP17213 487 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 KIR2DL3P43628 341 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PHC1P78364 1004 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 DGCR2P98153 550 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 MGAT5Q09328 741 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 TRIM25Q14258 630 aaKnown RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 R3HDM1Q15032 1099 aaKnown RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 SPTY2D1Q68D10 685 aaPredicted RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 FAM111BQ6SJ93 734 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 MAMDC4Q6UXC1 1216 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 LHFPL2Q6ZUX7 228 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 ADGRE4PQ86SQ3 457 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 RASSF3Q86WH2 238 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 CXorf67Q86X51 503 aaPredicted RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 GSPT2Q8IYD1 628 aaKnown RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 CDYL2Q8N8U2 506 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PIK3C3Q8NEB9 887 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 EAF2Q96CJ1 260 aaPredicted RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 TCF25Q9BQ70 676 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 ZNF341Q9BYN7 854 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 OSBPL6Q9BZF3 934 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PITHD1Q9GZP4 211 aaPredicted RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 EPC1Q9H2F5 836 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 TLR9Q9NR96 1032 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 TOPORSQ9NS56 1045 aaPredicted RBP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PCDHB6Q9Y5E3 794 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PPP2R3BQ9Y5P8 575 aa3.49□□□□□ -1.85
SMAD1-203ENST00000502342 PMS2P1A4D2B8 440 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CAPN14A8MX76 684 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 NRP2O60462 931 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 ULK1O75385 1050 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 STC2O76061 302 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 JUNP05412 331 aaKnown RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 PFKMP08237 780 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 VSIG10L2P0DP72 767 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CANXP27824 592 aaKnown RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CASRP41180 1078 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 MANFP55145 182 aaKnown RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 NPEPPSP55786 919 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 LGALS4P56470 323 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 NRG3P56975 720 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 SCAND1P57086 179 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 ADAM8P78325 824 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CCT2P78371 535 aaKnown RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CDK17Q00537 523 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 PPARAQ07869 468 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 IQSEC1Q6DN90 963 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 LMBR1LQ6UX01 489 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 LYSMD2Q8IV50 215 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 C1orf210Q8IVY1 113 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 ELOA2Q8IYF1 753 aaPredicted RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CMTM4Q8IZR5 234 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 THEMISQ8N1K5 641 aaPredicted RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CLRN3Q8NCR9 226 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 OR5M3Q8NGP4 307 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 TGFBRAP1Q8WUH2 860 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 FAM126AQ9BYI3 521 aaPredicted RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 CSRNP2Q9H175 543 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 C14orf93Q9H972 538 aaKnown RBP3.48□□□□□ -1.85
SMAD1-203ENST00000502342 MSL2Q9HCI7 577 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 TMPRSS11EQ9UL52 423 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 TESMINQ9Y4I5 508 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
SMAD1-203ENST00000502342 C1QTNF3-AMACRE9PGA6 284 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 BRINP1O60477 761 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 ALDH1A2O94788 518 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 LY86O95711 162 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 CFBP00751 764 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 TNFRSF1AP19438 455 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 SESN3P58005 492 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 TMPRSS15P98073 1019 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 ZXDAP98168 799 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 UBE3CQ15386 1083 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 UGT8Q16880 541 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 GAGE13Q4V321 117 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 PITRM1Q5JRX3 1037 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 FKBP15Q5T1M5 1219 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 EGFLAMQ63HQ2 1017 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 ATL2Q8NHH9 583 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 EDAQ92838 391 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 PGBD4Q96DM1 585 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 PLEKHG4BQ96PX9 1271 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 FDXACB1Q9BRP7 624 aaPredicted RBP3.47□□□□□ -1.85
SMAD1-203ENST00000502342 ZNF747Q9BV97 191 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 HAPLN2Q9GZV7 340 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 VPS11Q9H270 941 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 TMPRSS5Q9H3S3 457 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 IL23AQ9NPF7 189 aa3.47□□□□□ -1.85
SMAD1-203ENST00000502342 EVLQ9UI08 416 aaPredicted RBP3.47□□□□□ -1.85
SMAD1-203ENST00000502342 PRSS50Q9UI38 385 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms