RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 ROM1Q03395 351 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 RBL2Q08999 1139 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 PRAMEF9Q5VWM5 478 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 KRT40Q6A162 431 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 ESRP1Q6NXG1 681 aaKnown RBP3.66□□□□□ -1.82
RBM39-242ENST00000498280 LILRB2Q8N423 598 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 MDGA1Q8NFP4 955 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 HAPLN2Q9GZV7 340 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 TOR3AQ9H497 397 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 SYNPO2LQ9H987 977 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 ING3Q9NXR8 418 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 SORCS3Q9UPU3 1222 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 HS3ST4Q9Y661 456 aa3.66□□□□□ -1.82
RBM39-242ENST00000498280 COL4A3Q01955 1670 aa3.65□□□□□ -1.82
RBM39-242ENST00000498280 UBA6A0AVT1 1052 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 PTPDC1A2A3K4 754 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 GOLGA6L6A8MZA4 724 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 SLC9A1P19634 815 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 FNTBP49356 437 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 COLEC12Q5KU26 742 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 ZNF362Q5T0B9 420 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 HECTD2Q5U5R9 776 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 CREB3L3Q68CJ9 461 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 JMYQ8N9B5 988 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 BEND2Q8NDZ0 799 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 CPT1CQ8TCG5 803 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 THAP3Q8WTV1 239 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 TUBGCP5Q96RT8 1024 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 ELF4Q99607 663 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 HIRIP3Q9BW71 556 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 CPEB1Q9BZB8 566 aaKnown RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 PRDM13Q9H4Q3 707 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 POLR3BQ9NW08 1133 aaPredicted RBP3.65□□□□□ -1.83
RBM39-242ENST00000498280 KCMF1Q9P0J7 381 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 SAMD15Q9P1V8 674 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 FZD1Q9UP38 647 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 PTCH2Q9Y6C5 1203 aa3.65□□□□□ -1.83
RBM39-242ENST00000498280 POLR2AP24928 1970 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 CENPVL1A0A0U1RR11 272 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 AHRRA9YTQ3 701 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 IPO13O94829 963 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 KIR2DL3P43628 341 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 CLK3P49761 638 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 CCDC144BQ3MJ40 725 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 GAGE13Q4V321 117 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 TTC38Q5R3I4 469 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 MFSD5Q6N075 450 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 ZCCHC8Q6NZY4 707 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 RD3Q7Z3Z2 195 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 LRP10Q7Z4F1 713 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 CMTM4Q8IZR5 234 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 KIAA1958Q8N8K9 716 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 PIK3C3Q8NEB9 887 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 MYL10Q9BUA6 226 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 TEX101Q9BY14 249 aa3.64□□□□□ -1.83
RBM39-242ENST00000498280 MRPL4Q9BYD3 311 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 NCOA5Q9HCD5 579 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 H2AFY2Q9P0M6 372 aaPredicted RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 TNPO3Q9Y5L0 923 aaKnown RBP3.64□□□□□ -1.83
RBM39-242ENST00000498280 ARHGEF17Q96PE2 2063 aaPredicted RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 DNAJC8O75937 253 aaPredicted RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 SCAF4O95104 1147 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 APOL3O95236 402 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 JUNP05412 331 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 SDSP20132 328 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 CASRP41180 1078 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 SPIDRQ14159 915 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 NBPF6Q5VWK0 638 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 PAPD7Q5XG87 772 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 NAIF1Q69YI7 327 aaPredicted RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 KANSL1Q7Z3B3 1105 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 CHST14Q8NCH0 376 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 ST8SIA2Q92186 375 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 RTF1Q92541 710 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 ARL8AQ96BM9 186 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 NBPF4Q96M43 638 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 SRPK1Q96SB4 655 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 LSM14BQ9BX40 385 aaKnown RBP3.63□□□□□ -1.83
RBM39-242ENST00000498280 ENKD1Q9H0I2 346 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 POFUT1Q9H488 388 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 MTG2Q9H4K7 406 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 KANSL2Q9H9L4 492 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 CYP4F11Q9HBI6 524 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 ANKFY1Q9P2R3 1169 aa3.63□□□□□ -1.83
RBM39-242ENST00000498280 A0A0A6YYJ9 748 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 LCHNA4D1U4 455 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 HOXA3O43365 443 aaPredicted RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 MFAP3LO75121 409 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 PRPF6O94906 941 aaKnown RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 NPTXRO95502 500 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 GAAP10253 952 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 NPEPPSP55786 919 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 CD69Q07108 199 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 BMS1Q14692 1282 aaKnown RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 ZC3H12BQ5HYM0 836 aaKnown RBP3.62□□□□□ -1.83
RBM39-242ENST00000498280 SOGA3Q5TF21 947 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 OLFML1Q6UWY5 402 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 BMP8AQ7Z5Y6 402 aa3.62□□□□□ -1.83
RBM39-242ENST00000498280 XYLT1Q86Y38 959 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms