RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GAREM2Q75VX8 874 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 PHYKPLQ8IUZ5 450 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 FAM177A1Q8N128 213 aaPredicted RBP4.58□□□□□ -1.68
PSPC1-205ENST00000497722 THEMISQ8N1K5 641 aaPredicted RBP4.58□□□□□ -1.68
PSPC1-205ENST00000497722 CHAC2Q8WUX2 184 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 GCDHQ92947 438 aaPredicted RBP4.58□□□□□ -1.68
PSPC1-205ENST00000497722 PLEKHG4BQ96PX9 1271 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 MYL10Q9BUA6 226 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 ENKD1Q9H0I2 346 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 SPC25Q9HBM1 224 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 DNAI1Q9UI46 699 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 TNFRSF18Q9Y5U5 241 aa4.58□□□□□ -1.68
PSPC1-205ENST00000497722 UBE2QL1A1L167 161 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 ELL2O00472 640 aaPredicted RBP4.57□□□□□ -1.68
PSPC1-205ENST00000497722 CYP27B1O15528 508 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 MTSS1O43312 755 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 DNAJC6O75061 913 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 TOX4O94842 621 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 CPEP16870 476 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 NCLP19338 710 aaKnown RBP4.57□□□□□ -1.68
PSPC1-205ENST00000497722 IL2P60568 153 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 HHEXQ03014 270 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 ABHD18Q0P651 414 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 TUBA3CQ13748 450 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 EGFLAMQ63HQ2 1017 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 TUBA3EQ6PEY2 450 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 FAM111BQ6SJ93 734 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 PCSK4Q6UW60 755 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 Q6ZPA2 131 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 ANKRD35Q8N283 1001 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 EFHBQ8N7U6 833 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 OR2W6PQ8NHA6 318 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 RTF1Q92541 710 aaKnown RBP4.57□□□□□ -1.68
PSPC1-205ENST00000497722 USP7Q93009 1102 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 MIEF2Q96C03 454 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 TARS2Q9BW92 718 aaKnown RBP4.57□□□□□ -1.68
PSPC1-205ENST00000497722 TMX1Q9H3N1 280 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 POFUT1Q9H488 388 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 MTG2Q9H4K7 406 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 IL23AQ9NPF7 189 aa4.57□□□□□ -1.68
PSPC1-205ENST00000497722 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 KLRG2A4D1S0 409 aaPredicted RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 ZNF891A8MT65 544 aaPredicted RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 PEX11BO96011 259 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 JUNP05412 331 aaKnown RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 KIR2DL3P43628 341 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 DPTQ07507 201 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 TOB2Q14106 344 aaPredicted RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 GPR158Q5T848 1215 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 DDX46Q7L014 1031 aaKnown RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 C11orf74Q86VG3 221 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 PASD1Q8IV76 773 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 ZZZ3Q8IYH5 903 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 NXPE1Q8N323 547 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 CHTF18Q8WVB6 975 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 RPGRQ92834 1020 aaKnown RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 ZNF496Q96IT1 587 aaPredicted RBP4.56□□□□□ -1.68
PSPC1-205ENST00000497722 CSRNP2Q9H175 543 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 CAAP1Q9H8G2 361 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 TOMM22Q9NS69 142 aa4.56□□□□□ -1.68
PSPC1-205ENST00000497722 CADPSQ9ULU8 1353 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 XDHP47989 1333 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 LOC105371045A0A1W2PR82 267 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 GAAP10253 952 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 MCM7P33993 719 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 ATXN1P54253 815 aaKnown RBP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 PCBP1Q15365 356 aaKnown RBP eCLIP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 SEPT7Q16181 437 aaKnown RBP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 ZBTB41Q5SVQ8 909 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 LDLRAD3Q86YD5 345 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 CMTM4Q8IZR5 234 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 UBR7Q8N806 425 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 C7orf31Q8N865 590 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 SMC1BQ8NDV3 1235 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 ZCRB1Q8TBF4 217 aaKnown RBP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 LARP4BQ92615 738 aaKnown RBP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 TCF25Q9BQ70 676 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 TRIM8Q9BZR9 551 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 MMRN2Q9H8L6 949 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 C14orf93Q9H972 538 aaKnown RBP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.55□□□□□ -1.68
PSPC1-205ENST00000497722 GPRC5BQ9NZH0 403 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 MAPRE3Q9UPY8 281 aa4.55□□□□□ -1.68
PSPC1-205ENST00000497722 MYPNQ86TC9 1320 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 RAB11FIP3O75154 756 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 SEC24DO94855 1032 aaPredicted RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 PFKMP08237 780 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 KRT4P19013 534 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 CD40P25942 277 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 MASP1P48740 699 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 KPNA1P52294 538 aaPredicted RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 PHC1P78364 1004 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 OCRLQ01968 901 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 STRN3Q13033 797 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 SPIDRQ14159 915 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 ELAVL1Q15717 326 aaKnown RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 FKBP15Q5T1M5 1219 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 NAIF1Q69YI7 327 aaPredicted RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 TIGD7Q6NT04 549 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms