RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 MCPH1Q8NEM0 835 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 KCNN1Q92952 543 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 HLA-CQ95604 372 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 SNX21Q969T3 373 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 FZD8Q9H461 694 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 FAM105AQ9NUU6 356 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 LRWD1Q9UFC0 647 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 SMC3Q9UQE7 1217 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 LZTS1Q9Y250 596 aa12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 MORC2Q9Y6X9 1032 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-210ENST00000497440 A0A1B0GUA9 196 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 NCK2O43639 380 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 TSPAN1O60635 241 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 OFD1O75665 1012 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 EFEMP2O95967 443 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 AXLP30530 894 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 CTNNB1P35222 781 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 RAB27AP51159 221 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 KCNC3Q14003 757 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 ERMNQ8TAM6 284 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 PPM1EQ8WY54 764 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 PABPC5Q96DU9 382 aaKnown RBP12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 NLRP4Q96MN2 994 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
SHROOM3-210ENST00000497440 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 MEIS3P2A8K0S8 358 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 FSCN2O14926 492 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 SLC26A4O43511 780 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 NCLP19338 710 aaKnown RBP12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 TFF2Q03403 129 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 LEXMQ3ZCV2 418 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 TCEAL5Q5H9L2 206 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 HAUS3Q68CZ6 603 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 BRAPQ7Z569 592 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 DAW1Q8N136 415 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 ALG13Q9NP73 1137 aaKnown RBP12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 PCDHB2Q9Y5E7 798 aa12.11□□□□□ -0.47
SHROOM3-210ENST00000497440 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 ZMYM2Q9UBW7 1377 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 FGF18O76093 207 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 ARF4P18085 180 aaPredicted RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 LAG3P18627 525 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 IRS1P35568 1242 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 HYAL1Q12794 435 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 ADAM15Q13444 863 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 TFDP1Q14186 410 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 PAN2Q504Q3 1202 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 PDE12Q6L8Q7 609 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 KCNT2Q6UVM3 1135 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 LRRC43Q8N309 656 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 GSTCDQ8NEC7 633 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 POF1BQ8WVV4 589 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 GPRC5CQ9NQ84 441 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 AAASQ9NRG9 546 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 KIAA1024Q9UPX6 916 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 PCDHB12Q9Y5F1 795 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 CNTNAP2Q9UHC6 1331 aa12.1□□□□□ -0.47
SHROOM3-210ENST00000497440 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 PP2D1A8MPX8 630 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 EYA4O95677 639 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 PDCP20941 246 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 SYT1P21579 422 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 CDC25AP30304 524 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 NAMPTP43490 491 aa12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 AFF1P51825 1210 aaKnown RBP12.09□□□□□ -0.47
SHROOM3-210ENST00000497440 ERVFC1P60507 584 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms