RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 NKX3-2P78367 333 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 LSAMPQ13449 338 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 HSP90AB3PQ58FF7 597 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 KIF6Q6ZMV9 814 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 BICC1Q9H694 974 aaKnown RBP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 CWC25Q9NXE8 425 aaPredicted RBP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 LRP2BPQ9P2M1 347 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 CCNL1Q9UK58 526 aaPredicted RBP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 COA3Q9Y2R0 106 aaPredicted RBP6.57□□□□□ -1.36
GGPS1-208ENST00000497327 PCDHA2Q9Y5H9 948 aa6.57□□□□□ -1.36
GGPS1-208ENST00000497327 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 MATN3O15232 486 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 B4GALT3O60512 393 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 LRG1P02750 347 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 PCCAP05165 728 aaPredicted RBP6.56□□□□□ -1.36
GGPS1-208ENST00000497327 SSBP05455 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
GGPS1-208ENST00000497327 ZNF20P17024 532 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 KCNJ6P48051 423 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 RGS3P49796 1198 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 STEAP3Q658P3 488 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 CPZQ66K79 652 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 BORAQ6PGQ7 559 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 TEPPQ6URK8 271 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 UBE3BQ7Z3V4 1068 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 TOE1Q96GM8 510 aaKnown RBP6.56□□□□□ -1.36
GGPS1-208ENST00000497327 LOXL4Q96JB6 756 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 ZSWIM3Q96MP5 696 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 C8orf49Q96NF6 230 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 PLA2G12BQ9BX93 195 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 PCDHB4Q9Y5E5 795 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 MYH14Q7Z406 1995 aaKnown RBP6.56□□□□□ -1.36
GGPS1-208ENST00000497327 KAT6BQ8WYB5 2073 aa6.56□□□□□ -1.36
GGPS1-208ENST00000497327 BTAF1O14981 1849 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 UBN2Q6ZU65 1347 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 SALL3Q9BXA9 1300 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 CDHR2Q9BYE9 1310 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 ARFGEF2Q9Y6D5 1785 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 PLSCR1O15162 318 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 RAB11FIP3O75154 756 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 DDAH1O94760 285 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 GJB6O95452 261 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 CSF1RP07333 972 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 FGRP09769 529 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 GRIA2P42262 883 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 MLLT6P55198 1093 aaPredicted RBP6.55□□□□□ -1.36
GGPS1-208ENST00000497327 FXNQ16595 210 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 SLC10A6Q3KNW5 377 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 CLEC4GQ6UXB4 293 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 ZBTB38Q8NAP3 1195 aaPredicted RBP6.55□□□□□ -1.36
GGPS1-208ENST00000497327 ZCCHC14Q8WYQ9 949 aaKnown RBP6.55□□□□□ -1.36
GGPS1-208ENST00000497327 LCORQ96JN0 433 aaPredicted RBP6.55□□□□□ -1.36
GGPS1-208ENST00000497327 YIPF4Q9BSR8 244 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 CLDND1Q9NY35 253 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 EXOC6BQ9Y2D4 811 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 COL5A3P25940 1745 aaPredicted RBP6.55□□□□□ -1.36
GGPS1-208ENST00000497327 BRWD3Q6RI45 1802 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 SBF2Q86WG5 1849 aa6.55□□□□□ -1.36
GGPS1-208ENST00000497327 LY75O60449 1722 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 SURF6O75683 361 aaKnown RBP6.54□□□□□ -1.36
GGPS1-208ENST00000497327 TXNRD1Q16881 649 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 HSP90AB4PQ58FF6 505 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 SUSD4Q5VX71 490 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 LMBR1LQ6UX01 489 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 SMIM5Q71RC9 77 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 FAM124AQ86V42 546 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 PROSER1Q86XN7 944 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 C16orf71Q8IYS4 520 aaPredicted RBP6.54□□□□□ -1.36
GGPS1-208ENST00000497327 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 OTUD7AQ8TE49 926 aaPredicted RBP6.54□□□□□ -1.36
GGPS1-208ENST00000497327 EPB41L1Q9H4G0 881 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 ZNF408Q9H9D4 720 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 PPP4R1LQ9P1A2 415 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 NARFQ9UHQ1 456 aa6.54□□□□□ -1.36
GGPS1-208ENST00000497327 MSCO60682 206 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 NTSR2O95665 410 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 GPTP24298 496 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 ERCC5P28715 1186 aaPredicted RBP6.53□□□□□ -1.36
GGPS1-208ENST00000497327 PPP2R2AP63151 447 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 MAP4K2Q12851 820 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 PRAMEF18Q5VWM3 479 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 FAM89AQ96GI7 184 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 CHAMP1Q96JM3 812 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 LRRCC1Q9C099 1032 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 MYOTQ9UBF9 498 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 RBPJLQ9UBG7 517 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 STAP2Q9UGK3 403 aa6.53□□□□□ -1.36
GGPS1-208ENST00000497327 PA2G4Q9UQ80 394 aaKnown RBP6.53□□□□□ -1.36
GGPS1-208ENST00000497327 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 LAMTOR5O43504 91 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 COL6A1P12109 1028 aa6.52□□□□□ -1.37
GGPS1-208ENST00000497327 HMGB2P26583 209 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms