RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 POFUT1Q9H488 388 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 ZMAT4Q9H898 229 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 POLR3BQ9NW08 1133 aaPredicted RBP4.8□□□□□ -1.64
VPS26A-208ENST00000497022 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
VPS26A-208ENST00000497022 PLAAQ9Y263 795 aa4.8□□□□□ -1.64
VPS26A-208ENST00000497022 A0A0A6YYJ9 748 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 A0A1W2PRX2 142 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 TGM5O43548 720 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 APOL3O95236 402 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 BMP5P22003 454 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 IL12RB1P42701 662 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 BPIFB4P59827 614 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 ADAM8P78325 824 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 SMAD3P84022 425 aaKnown RBP4.79□□□□□ -1.64
VPS26A-208ENST00000497022 TCIRG1Q13488 830 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 LRRC32Q14392 662 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 KIAA1841Q6NSI8 718 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 SGMS1Q86VZ5 419 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 PASD1Q8IV76 773 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 AHI1Q8N157 1196 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 D2HGDHQ8N465 521 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 ANKRD53Q8N9V6 530 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 PLA2G15Q8NCC3 412 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 SMC1BQ8NDV3 1235 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 TMEM176AQ96HP8 235 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 RPL10LQ96L21 214 aaKnown RBP4.79□□□□□ -1.64
VPS26A-208ENST00000497022 GPHA2Q96T91 129 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 MTG2Q9H4K7 406 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 DNAI1Q9UI46 699 aa4.79□□□□□ -1.64
VPS26A-208ENST00000497022 MAFGO15525 162 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 DAPK3O43293 454 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 HNRNPLP14866 589 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS26A-208ENST00000497022 CD40P25942 277 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 SCNN1BP51168 640 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 KPNA1P52294 538 aaPredicted RBP4.78□□□□□ -1.64
VPS26A-208ENST00000497022 SEPT7Q16181 437 aaKnown RBP4.78□□□□□ -1.64
VPS26A-208ENST00000497022 SPTY2D1Q68D10 685 aaPredicted RBP4.78□□□□□ -1.64
VPS26A-208ENST00000497022 MFSD3Q96ES6 412 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 MPHOSPH9Q99550 1183 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 SYNPO2Q9UMS6 1093 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 SH3BP1Q9Y3L3 701 aa4.78□□□□□ -1.64
VPS26A-208ENST00000497022 A0A0A6YYK5 440 aaPredicted RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 GOLGA8BA8MQT2 603 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 CAPN14A8MX76 684 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 ELL2O00472 640 aaPredicted RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 OPHN1O60890 802 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 SART3Q15020 963 aaKnown RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 GAGE13Q4V321 117 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 GAREM2Q75VX8 874 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 NOP9Q86U38 636 aaKnown RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 ZNF496Q96IT1 587 aaPredicted RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 NOL10Q9BSC4 688 aaKnown RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 SOX7Q9BT81 388 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 OSBPL6Q9BZF3 934 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 SPTLC3Q9NUV7 552 aa4.77□□□□□ -1.65
VPS26A-208ENST00000497022 USP36Q9P275 1121 aaKnown RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
VPS26A-208ENST00000497022 MYPNQ86TC9 1320 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 A0A087X0B3 334 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 UBE2QL1A1L167 161 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 GSG1L2A8MUP6 293 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 ENPP3O14638 875 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 TOX4O94842 621 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 RHOBTB3O94955 611 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 VSIG10L2P0DP72 767 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 OCRLQ01968 901 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 CRHR2Q13324 411 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 RRP1BQ14684 758 aaKnown RBP4.76□□□□□ -1.65
VPS26A-208ENST00000497022 GPR158Q5T848 1215 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 FAM111BQ6SJ93 734 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 ESPNLQ6ZVH7 1005 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 RPUSD2Q8IZ73 545 aaKnown RBP4.76□□□□□ -1.65
VPS26A-208ENST00000497022 ZNF610Q8N9Z0 462 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 OR2W6PQ8NHA6 318 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 HIST1H2AHQ96KK5 128 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 HIST1H2AJQ99878 128 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 IL23AQ9NPF7 189 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 MSRAQ9UJ68 235 aa4.76□□□□□ -1.65
VPS26A-208ENST00000497022 FSBPO95073 299 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 PCDH8O95206 1070 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 FKBP9O95302 570 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 JUNP05412 331 aaKnown RBP4.75□□□□□ -1.65
VPS26A-208ENST00000497022 LSP1P33241 339 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 ADCYAP1R1P41586 468 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 KIR2DL3P43628 341 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 LSSP48449 732 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 PHC1P78364 1004 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 MRPS21P82921 87 aaKnown RBP4.75□□□□□ -1.65
VPS26A-208ENST00000497022 MAN2A1Q16706 1144 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 KRT40Q6A162 431 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 FKBP9P1Q75LS8 142 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 PRIMA1Q86XR5 153 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 ANKRD35Q8N283 1001 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 PPP1R14CQ8TAE6 165 aa4.75□□□□□ -1.65
VPS26A-208ENST00000497022 TCF25Q9BQ70 676 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms