RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 HSPBP1Q9NZL4 362 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 VWA5AO00534 786 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 TBC1D12O60347 775 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-212ENST00000496514 KRT13P13646 458 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 JAM2P57087 298 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
PDE6B-212ENST00000496514 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-212ENST00000496514 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
PDE6B-212ENST00000496514 GOLGA6BA6NDN3 693 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 EIF3DO15371 548 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 SLC16A3O15427 465 aaKnown RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 KIF4AO95239 1232 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 KRT14P02533 472 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 HARSP12081 509 aaKnown RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ZNF131P52739 623 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ANO5Q75V66 913 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 TPCN2Q8NHX9 752 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 SLC35G2Q8TBE7 412 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 UBIAD1Q9Y5Z9 338 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ZBED4O75132 1171 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 TNFAIP3P21580 790 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 VAMP7P51809 220 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 RNF10Q8N5U6 811 aaKnown RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 INPP4AQ96PE3 977 aaPredicted RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 RIT2Q99578 217 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 DPH5Q9H2P9 285 aa13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ZC3H4Q9UPT8 1303 aaKnown RBP13.36□□□□□ -0.27
PDE6B-212ENST00000496514 ZNF862O60290 1169 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 NR3C2P08235 984 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 NLGN2Q8NFZ4 835 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 OR2W6PQ8NHA6 318 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
PDE6B-212ENST00000496514 AMACRQ9UHK6 382 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 DENND3A2RUS2 1198 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 SGPL1O95470 568 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 MTERF2Q49AM1 385 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 AENQ8WTP8 325 aaKnown RBP13.35□□□□□ -0.27
PDE6B-212ENST00000496514 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 RPGRIP1Q96KN7 1286 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
PDE6B-212ENST00000496514 CYP26A1O43174 497 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 GUCY2CP25092 1073 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 ADSSP30520 456 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 MARCKSL1P49006 195 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 CNTN2Q02246 1040 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 TRAF1Q13077 416 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 C1orf220Q5T0J3 134 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 PCNX4Q63HM2 1172 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 VPS36Q86VN1 386 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 OLIG1Q8TAK6 271 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 BICD1Q96G01 975 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 GGA3Q9NZ52 723 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 ODF2LQ9ULJ1 636 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 COG5Q9UP83 839 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
PDE6B-212ENST00000496514 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
PDE6B-212ENST00000496514 PLS3P13797 630 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 ATP1A2P50993 1020 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 PICK1Q9NRD5 415 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 DMAC2Q9NW81 257 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
PDE6B-212ENST00000496514 TARSL2A2RTX5 802 aaKnown RBP13.34□□□□□ -0.27
PDE6B-212ENST00000496514 PPP1R37O75864 691 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 RGS20O76081 388 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 SLC20A2Q08357 652 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
PDE6B-212ENST00000496514 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 TRIM51Q9BSJ1 452 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 TMEM117Q9H0C3 514 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 KRIT1O00522 736 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 FERP16591 822 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 PTPRAP18433 802 aa13.34□□□□□ -0.27
PDE6B-212ENST00000496514 NPTX2P47972 431 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms