RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
CLK1-214ENST00000496205 CISD2Q8N5K1 135 aaKnown RBP5.18□□□□□ -1.58
CLK1-214ENST00000496205 COG1Q8WTW3 980 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 HAS1Q92839 578 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 GPHA2Q96T91 129 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 ORAI3Q9BRQ5 295 aa5.18□□□□□ -1.58
CLK1-214ENST00000496205 THRAP3Q9Y2W1 955 aaKnown RBP5.18□□□□□ -1.58
CLK1-214ENST00000496205 KATNA1O75449 491 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 LMNAP02545 664 aaKnown RBP5.17□□□□□ -1.58
CLK1-214ENST00000496205 ADCYAP1R1P41586 468 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 ATXN1P54253 815 aaKnown RBP5.17□□□□□ -1.58
CLK1-214ENST00000496205 ADAM8P78325 824 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 STAT4Q14765 748 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 DHCR24Q15392 516 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 CRY1Q16526 586 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 TMEM177Q53S58 311 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 GAREM2Q75VX8 874 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 DDX46Q7L014 1031 aaKnown RBP5.17□□□□□ -1.58
CLK1-214ENST00000496205 RHOUQ7L0Q8 258 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 GBP4Q96PP9 640 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 MLST8Q9BVC4 326 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 GPR87Q9BY21 358 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 CELF4Q9BZC1 486 aaKnown RBP5.17□□□□□ -1.58
CLK1-214ENST00000496205 HOMER2Q9NSB8 354 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 H2AFY2Q9P0M6 372 aaPredicted RBP5.17□□□□□ -1.58
CLK1-214ENST00000496205 MAGEL2Q9UJ55 1249 aa5.17□□□□□ -1.58
CLK1-214ENST00000496205 CCDC66A2RUB6 948 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 C2orf78A6NCI8 922 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 SCDO00767 359 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 GPR39O43194 453 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 PARNO95453 639 aaKnown RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 NR4A1P22736 598 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 PTGS2P35354 604 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 DNM2P50570 870 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 RABGGTBP53611 331 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 MRPS21P82921 87 aaKnown RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 LACTBP83111 547 aaPredicted RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 NOSTRINQ8IVI9 506 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 GSPT2Q8IYD1 628 aaKnown RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 AHI1Q8N157 1196 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 ATL2Q8NHH9 583 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 ZNF764Q96H86 408 aaPredicted RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 RPL10LQ96L21 214 aaKnown RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 TYW1Q9NV66 732 aaKnown RBP5.16□□□□□ -1.58
CLK1-214ENST00000496205 TRPS1Q9UHF7 1281 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 MCM8Q9UJA3 840 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 PHLDB1Q86UU1 1377 aa5.16□□□□□ -1.58
CLK1-214ENST00000496205 KLRG2A4D1S0 409 aaPredicted RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 B4E1Z4 1266 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 NPTXRO95502 500 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 F2P00734 622 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 ATP2A2P16615 1042 aaKnown RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 ELAVL1Q15717 326 aaKnown RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 RABL3Q5HYI8 236 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 FAM111BQ6SJ93 734 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 UBE2R2Q712K3 238 aaPredicted RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 DDX53Q86TM3 631 aaKnown RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 PRIMA1Q86XR5 153 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 SMC1BQ8NDV3 1235 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 LENG9Q96B70 501 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 CCDC8Q9H0W5 538 aaPredicted RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 SLC6A15Q9H2J7 730 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 G3BP2Q9UN86 482 aaKnown RBP5.15□□□□□ -1.59
CLK1-214ENST00000496205 VWA7Q9Y334 891 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 WASHC2CQ9Y4E1 1318 aa5.15□□□□□ -1.59
CLK1-214ENST00000496205 UBE2QL1A1L167 161 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 GOLGA6L22H0YM25 854 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 DVL2O14641 736 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 GUCY2FP51841 1108 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 MTMR1Q13613 665 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 C1QL3Q5VWW1 255 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 ZNF276Q8N554 614 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 ANKRD53Q8N9V6 530 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 CHST14Q8NCH0 376 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 HIPK4Q8NE63 616 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 CHTF18Q8WVB6 975 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 ASPSCR1Q9BZE9 553 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.14□□□□□ -1.59
CLK1-214ENST00000496205 VTA1Q9NP79 307 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 SPTLC3Q9NUV7 552 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 PTGFRNQ9P2B2 879 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 PACSIN3Q9UKS6 424 aa5.14□□□□□ -1.59
CLK1-214ENST00000496205 RBM8AQ9Y5S9 174 aaKnown RBP5.14□□□□□ -1.59
CLK1-214ENST00000496205 PTPDC1A2A3K4 754 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 GRID2IPA4D2P6 1211 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 GRXCR1A8MXD5 290 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 MASP2O00187 686 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 FOXP2O15409 715 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 MARCH6O60337 910 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 MAFO75444 373 aaPredicted RBP5.13□□□□□ -1.59
CLK1-214ENST00000496205 ZBTB48P10074 688 aaPredicted RBP5.13□□□□□ -1.59
CLK1-214ENST00000496205 NAT1P18440 290 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 APEX1P27695 318 aaKnown RBP5.13□□□□□ -1.59
CLK1-214ENST00000496205 FLT3P36888 993 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 ANTXR2P58335 489 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 BPIFB4P59827 614 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 TMPRSS15P98073 1019 aa5.13□□□□□ -1.59
CLK1-214ENST00000496205 KLHDC10Q6PID8 442 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms