RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NRG4Q8WWG1 115 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 HDAC10Q969S8 669 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 TTC17Q96AE7 1141 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 RUNDC1Q96C34 613 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 MVB12AQ96EY5 273 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 WDR92Q96MX6 357 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 GTPBP4Q9BZE4 634 aaKnown RBP6.97□□□□□ -1.29
SSR3-208ENST00000496050 GCM1Q9NP62 436 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 RBM12Q9NTZ6 932 aaKnown RBP6.97□□□□□ -1.29
SSR3-208ENST00000496050 SERPINB13Q9UIV8 391 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 MAGEL2Q9UJ55 1249 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 PMF1-BGLAPU3KQ54 211 aa6.97□□□□□ -1.29
SSR3-208ENST00000496050 A0A0A6YYK5 440 aaPredicted RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 CCDC154A6NI56 674 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 POLD1P28340 1107 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 MLLT6P55198 1093 aaPredicted RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 SESN2P58004 480 aaPredicted RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 PURAQ00577 322 aaKnown RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 MGAT5Q09328 741 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 RTP5Q14D33 572 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 EIF4HQ15056 248 aaKnown RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 KLHDC10Q6PID8 442 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 IFNL2Q8IZJ0 200 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 GPR156Q8NFN8 814 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 SIGLEC10Q96LC7 697 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 TAAR9Q96RI9 348 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 SOX7Q9BT81 388 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 POLR3BQ9NW08 1133 aaPredicted RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.96□□□□□ -1.3
SSR3-208ENST00000496050 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 IRAK3Q9Y616 596 aa6.96□□□□□ -1.3
SSR3-208ENST00000496050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
SSR3-208ENST00000496050 HTRA2O43464 458 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 TRIM27P14373 513 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 TAL1P17542 331 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 UBE4AQ14139 1066 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 GRM3Q14832 879 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 PGS1Q32NB8 556 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 PPP4R3AQ6IN85 833 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 RIN2Q8WYP3 895 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 GFM2Q969S9 779 aaKnown RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 FAM193BQ96PV7 902 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
SSR3-208ENST00000496050 L2HGDHQ9H9P8 463 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 DNAI1Q9UI46 699 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 SCOCQ9UIL1 159 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 VWA7Q9Y334 891 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 IPPQ9Y573 584 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 RPTORQ8N122 1335 aa6.95□□□□□ -1.3
SSR3-208ENST00000496050 FAM171A2A8MVW0 826 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 PHF2O75151 1096 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 PEX14O75381 377 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 MEF2AQ02078 507 aaPredicted RBP6.94□□□□□ -1.3
SSR3-208ENST00000496050 CD69Q07108 199 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 NOMO1Q15155 1222 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 CAMKK1Q8N5S9 505 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 FNIP1Q8TF40 1166 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 FBXO41Q8TF61 875 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 TIFAQ96CG3 184 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
SSR3-208ENST00000496050 C7orf25Q9BPX7 421 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 SARGQ9BW04 601 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
SSR3-208ENST00000496050 A0A1W2PR48 441 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 ETV2O00321 342 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 AKR1B10O60218 316 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 LY86O95711 162 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 LTA4HP09960 611 aaKnown RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 NBPF7P0C2Y1 421 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 COL6A1P12109 1028 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 EDNRBP24530 442 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 RPL13P26373 211 aaKnown RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 KCNQ1P51787 676 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 OS9Q13438 667 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 BIRC2Q13490 618 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 THEMIS2Q5TEJ8 643 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 CHST15Q7LFX5 561 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 BCL6BQ8N143 479 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 PJA1Q8NG27 643 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 DPF2Q92785 391 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 NKD2Q969F2 451 aaPredicted RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 UIMC1Q96RL1 719 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 PSMD1Q99460 953 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 ZNF700Q9H0M5 742 aa6.93□□□□□ -1.3
SSR3-208ENST00000496050 DDX20Q9UHI6 824 aaKnown RBP6.93□□□□□ -1.3
SSR3-208ENST00000496050 H3BML4 177 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 DDX3XO00571 662 aaKnown RBP eCLIP6.92□□□□□ -1.3
SSR3-208ENST00000496050 KLHL18O94889 574 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 HMGCRP04035 888 aa6.92□□□□□ -1.3
SSR3-208ENST00000496050 GAAP10253 952 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms