RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
PTPRF-214ENST00000496043 MXD4Q14582 209 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-214ENST00000496043 EMC2Q15006 297 aa14.21□□□□□ -0.13
PTPRF-214ENST00000496043 CLUL1Q15846 466 aa14.21□□□□□ -0.13
PTPRF-214ENST00000496043 FAM184AQ8NB25 1140 aa14.21□□□□□ -0.13
PTPRF-214ENST00000496043 CDCA3Q99618 268 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-214ENST00000496043 MTRQ99707 1265 aa14.21□□□□□ -0.13
PTPRF-214ENST00000496043 FOXP1Q9H334 677 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-214ENST00000496043 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-214ENST00000496043 FAM105AQ9NUU6 356 aa14.21□□□□□ -0.13
PTPRF-214ENST00000496043 REV3LO60673 3130 aa14.21□□□□□ -0.14
PTPRF-214ENST00000496043 CARNS1A5YM72 827 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 WNT7AO00755 349 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 PER2O15055 1255 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 DGAT1O75907 488 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 COL9A1P20849 921 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 RBM25P49756 843 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 POU5F1BQ06416 359 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 SMAD4Q13485 552 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 TFDP1Q14186 410 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 BMS1Q14692 1282 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 SMAD2Q15796 467 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 LONRF3Q496Y0 759 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 C8orf34Q49A92 452 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 GLB1LQ6UWU2 654 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 TMC7Q7Z402 723 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 ADHFE1Q8IWW8 467 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 RNF149Q8NC42 400 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 FBXO18Q8NFZ0 1043 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 MSLNLQ96KJ4 702 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
PTPRF-214ENST00000496043 KIF2CQ99661 725 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 CLEC1BQ9P126 229 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
PTPRF-214ENST00000496043 TBX10O75333 385 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 OFD1O75665 1012 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 EYA4O95677 639 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 AXLP30530 894 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 HOXA11P31270 313 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-214ENST00000496043 PBX3P40426 434 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 BCAR1P56945 870 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 COASYQ13057 564 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 ORC2Q13416 577 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-214ENST00000496043 PCBP1Q15365 356 aaKnown RBP eCLIP14.19□□□□□ -0.144e-7■□□□□ 9
PTPRF-214ENST00000496043 ZNF174Q15697 407 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 DUSP6Q16828 381 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
PTPRF-214ENST00000496043 SLC39A11Q8N1S5 342 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 PIGOQ8TEQ8 1089 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 KHSRPQ92945 711 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPRF-214ENST00000496043 LPPQ93052 612 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 TCF25Q9BQ70 676 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 TMEM60Q9H2L4 133 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 XPNPEP1Q9NQW7 623 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 ENTPD7Q9NQZ7 604 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 AGPAT5Q9NUQ2 364 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 PCDHB2Q9Y5E7 798 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 XIRP2A4UGR9 3374 aa14.19□□□□□ -0.14
PTPRF-214ENST00000496043 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
PTPRF-214ENST00000496043 A0A087WWV3 80 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 ERLIN2O94905 339 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 ALADP13716 330 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 ARL2P36404 184 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 TECP42680 631 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 RARRES1P49788 294 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 PTENP60484 403 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 RNASELQ05823 741 aaKnown RBP14.18□□□□□ -0.14
PTPRF-214ENST00000496043 ZP2Q05996 745 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 TMEM31Q5JXX7 168 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 PLPP4Q5VZY2 271 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 NACC1Q96RE7 527 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 POP1Q99575 1024 aaKnown RBP14.18□□□□□ -0.14
PTPRF-214ENST00000496043 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 KANSL3Q9P2N6 904 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 INPP5FQ9Y2H2 1132 aa14.18□□□□□ -0.14
PTPRF-214ENST00000496043 POTEMA6NI47 508 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 INO80B-WBP1J3KQ70 363 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 GPR37L1O60883 481 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 CXCL14O95715 111 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 SPATA31C1P0DKV0 1188 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 SRGAP2BP0DMP2 458 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 TRAPPC10P48553 1259 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 SMC1AQ14683 1233 aaKnown RBP14.17□□□□□ -0.14
PTPRF-214ENST00000496043 TMEM184AQ6ZMB5 413 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 AGMOQ6ZNB7 445 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 CATSPER3Q86XQ3 398 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
PTPRF-214ENST00000496043 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 MRPL43Q8N983 215 aaKnown RBP14.17□□□□□ -0.14
PTPRF-214ENST00000496043 ERMNQ8TAM6 284 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 URGCPQ8TCY9 931 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 LRFN3Q9BTN0 628 aa14.17□□□□□ -0.14
PTPRF-214ENST00000496043 POLR3CQ9BUI4 534 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms