RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 MLXIPQ9HAP2 919 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 XPNPEP1Q9NQW7 623 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 CWC15Q9P013 229 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 STRNO43815 780 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 ABCD1P33897 745 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 CYP2J2P51589 502 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 PPP2R5AQ15172 486 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 HDXQ7Z353 690 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 CACNA2D4Q7Z3S7 1137 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 LSM14BQ9BX40 385 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 KMT5AQ9NQR1 393 aa20.21■□□□□ 0.83
TSPAN4-212ENST00000494815 CCDC169A6NNP5 214 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 ERLIN1O75477 346 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 GYS2P54840 703 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 LY6KQ17RY6 165 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 MTERF2Q49AM1 385 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 CELF3Q5SZQ8 465 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 MAP4K3Q8IVH8 894 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 PCYT2Q99447 389 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 PLCB1Q9NQ66 1216 aa20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 PUF60Q9UHX1 559 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-212ENST00000494815 EXOC3O60645 756 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 NOL4O94818 638 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 ARIH2O95376 493 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 CYLC1P35663 651 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 STAT5BP51692 787 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 EMC2Q15006 297 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 TCERG1LQ5VWI1 586 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 CCDC62Q6P9F0 684 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 SYN2Q92777 582 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 CRACR2AQ9BSW2 395 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 NRBP2Q9NSY0 501 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 TBX20Q9UMR3 447 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 PPME1Q9Y570 386 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 ZNFX1Q9P2E3 1918 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 H0YCG3 227 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 SCP2P22307 547 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 LMAN1P49257 510 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 POLGP54098 1239 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 EXOC3L4Q17RC7 722 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 ZNF569Q5MCW4 686 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 PDXDC1Q6P996 788 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 RRAGAQ7L523 313 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 BSNDQ8WZ55 320 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 FAM167AQ96KS9 214 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 IFT74Q96LB3 600 aa20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 DHX33Q9H6R0 707 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-212ENST00000494815 A0A0U1RQJ8 604 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 CTAGE9A4FU28 777 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 LRRC53A6NM62 1247 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 RFC5P40937 340 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 CST9Q5W186 159 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 FBXO16Q8IX29 292 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 ACRBPQ8NEB7 543 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 ATRIPQ8WXE1 791 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 KCNN1Q92952 543 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 PNKPQ96T60 521 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 AZI2Q9H6S1 392 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 IVNS1ABPQ9Y6Y0 642 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 DENND3A2RUS2 1198 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 MAPK13O15264 365 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 ADORA2AP29274 412 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 TTLL4Q14679 1199 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 GBP6Q6ZN66 633 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 ARMCX2Q7L311 632 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 ZNF467Q7Z7K2 595 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 SLC7A3Q8WY07 619 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 GPR20Q99678 358 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 PDE11AQ9HCR9 933 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
TSPAN4-212ENST00000494815 NOP56O00567 594 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 LGR5O75473 907 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 ITGBL1O95965 494 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 KRT83P78385 493 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 TARBP2Q15633 366 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 FAM110CQ1W6H9 321 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 XXYLT1Q8NBI6 393 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 CEP89Q96ST8 783 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 POLR3FQ9H1D9 316 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 GANQ9H2C0 597 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 L1RE1Q9UN81 338 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 EIF3CLB5ME19 914 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 IPO7O95373 1038 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 ACTN2P35609 894 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 SOX10P56693 466 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 POLR2FP61218 127 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 BFSP1Q12934 665 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 INTS8Q75QN2 995 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 DHX37Q8IY37 1157 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 EIF3CQ99613 913 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 PTPN18Q99952 460 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 ARHGAP28Q9P2N2 729 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
TSPAN4-212ENST00000494815 DIS3Q9Y2L1 958 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms