RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 GALCP54803 685 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 DRG2P55039 364 aaKnown RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 BPIFB4P59827 614 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 RRP1BQ14684 758 aaKnown RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 DPY19L2Q6NUT2 758 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 U2AF1L4Q8WU68 220 aaKnown RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 DTNBP1Q96EV8 351 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 CDC42EP4Q9H3Q1 356 aaKnown RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 SLCO1B3Q9NPD5 702 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 AMFRQ9UKV5 643 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 ZNF510Q9Y2H8 683 aa10.9□□□□□ -0.66
LINC00488-201ENST00000494582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 COL22A1Q8NFW1 1626 aaPredicted RBP10.9□□□□□ -0.66
LINC00488-201ENST00000494582 TCRBV7S2A1N4TA0A589 114 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 FAM196BA6NMK8 535 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 IRS4O14654 1257 aaPredicted RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 CCNT1O60563 726 aaKnown RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 H2AFZP0C0S5 128 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 RARGP13631 454 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 VCAM1P19320 739 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 WDR4P57081 412 aaKnown RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 USP46P62068 366 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 FKBP3Q00688 224 aaKnown RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 AMPD3Q01432 767 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 OCRLQ01968 901 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 PUM3Q15397 648 aaKnown RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 C10orf76Q5T2E6 689 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 C4orf50Q6ZRC1 276 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 H2AFVQ71UI9 128 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 LNX1Q8TBB1 728 aaPredicted RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 DDX12PQ92771 950 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 INPP5DQ92835 1189 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 AK8Q96MA6 479 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 DCLRE1BQ9H816 532 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 KRT82Q9NSB4 513 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 ETNK2Q9NVF9 386 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.67
LINC00488-201ENST00000494582 HSFX1Q9UBD0 423 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 SUGT1Q9Y2Z0 365 aa10.9□□□□□ -0.67
LINC00488-201ENST00000494582 PVALEFA0A1B0GWK0 134 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 TBX10O75333 385 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 EYA4O95677 639 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 UCHL3P15374 230 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 STX2P32856 288 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CTSWP56202 376 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 RTP1P59025 263 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 KCNH2Q12809 1159 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 MTA1Q13330 715 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 MOGSQ13724 837 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CHRNA2Q15822 529 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 WDR72Q3MJ13 1102 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CCDC152Q4G0S7 254 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 ACSBG2Q5FVE4 666 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 TMEM63BQ5T3F8 832 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 PRUNE1Q86TP1 453 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 SLC35G2Q8TBE7 412 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 DTX3LQ8TDB6 740 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 ARHGEF26Q96DR7 871 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 GBP5Q96PP8 586 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 NAP1L3Q99457 506 aaPredicted RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 PITPNM3Q9BZ71 974 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 NT5C3AQ9H0P0 336 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 STMN4Q9H169 189 aaPredicted RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 PITPNM2Q9BZ72 1349 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CYTH3O43739 400 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CHKAP35790 457 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 YARSP54577 528 aaKnown RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 PPATQ06203 517 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 DNAJC3Q13217 504 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 DHX34Q14147 1143 aaKnown RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 ECM1Q16610 540 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 LARP4BQ92615 738 aaKnown RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 KRT35Q92764 455 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 TUBGCP5Q96RT8 1024 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 TSG101Q99816 390 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 RIOK1Q9BRS2 568 aaKnown RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CADM1Q9BY67 442 aaKnown RBP10.89□□□□□ -0.67
LINC00488-201ENST00000494582 CPVLQ9H3G5 476 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 TBK1Q9UHD2 729 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 ATAD5Q96QE3 1844 aa10.89□□□□□ -0.67
LINC00488-201ENST00000494582 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 hCG_2014768A0A024R1R8 64 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 A0A0A6YYK5 440 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 MAGEA13PA6NCF6 341 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 FGRP09769 529 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ALAS1P13196 640 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CHRNB2P17787 502 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 TXKP42681 527 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 KCNJ1P48048 391 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CTTNQ14247 550 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 711.7 ms