RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GPT2Q8TD30 523 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 SPIRE2Q8WWL2 714 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 MRPL44Q9H9J2 332 aaKnown RBP16.06■□□□□ 0.16
BRCA1-223ENST00000494123 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 NOC2LQ9Y3T9 749 aaKnown RBP16.06■□□□□ 0.16
BRCA1-223ENST00000494123 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 GPR182O15218 404 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 CSDE1O75534 798 aaKnown RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 SMC2O95347 1197 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 EFNA5P52803 228 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 DPYDQ12882 1025 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 CDCA2Q69YH5 1023 aaPredicted RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 IFNLR1Q8IU57 520 aaPredicted RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 IFIH1Q9BYX4 1025 aaKnown RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 EXOC1Q9NV70 894 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 TBC1D7Q9P0N9 293 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 ERLIN2O94905 339 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 RPN1P04843 607 aaKnown RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 PFKMP08237 780 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 CD52P31358 61 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 NCKAP1LP55160 1127 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 MBTD1Q05BQ5 628 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 CAMK4Q16566 473 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 FAM228AQ86W67 206 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 SEPT8Q92599 483 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
BRCA1-223ENST00000494123 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 IL23AQ9NPF7 189 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 OLFML3Q9NRN5 406 aa16.05■□□□□ 0.16
BRCA1-223ENST00000494123 ADGRA3Q8IWK6 1321 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 K7ERI5 159 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 CXCL10P02778 98 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 FGFR4P22455 802 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 NMT1P30419 496 aaKnown RBP16.04■□□□□ 0.16
BRCA1-223ENST00000494123 ABCD1P33897 745 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
BRCA1-223ENST00000494123 STRN3Q13033 797 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 PCBP1Q15365 356 aaKnown RBP eCLIP16.04■□□□□ 0.16
BRCA1-223ENST00000494123 MAPK6Q16659 721 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 HAUS6Q7Z4H7 955 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 SMARCE1Q969G3 411 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 OSBPL7Q9BZF2 842 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 NUP62CLQ9H1M0 184 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
BRCA1-223ENST00000494123 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
BRCA1-223ENST00000494123 ARHGAP28Q9P2N2 729 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
BRCA1-223ENST00000494123 H0YGN5 161 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 KLRC4O43908 158 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 GCNT3O95395 438 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 PRKCBP05771 671 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 MAPTP10636 758 aaKnown RBP16.03■□□□□ 0.16
BRCA1-223ENST00000494123 SCP2P22307 547 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 GPNMBQ14956 572 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 STXBP4Q6ZWJ1 553 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 TMEM161BQ8NDZ6 487 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 APBB2Q92870 758 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-223ENST00000494123 TMEM134Q9H6X4 195 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
BRCA1-223ENST00000494123 ACRP10323 421 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 ALCAMQ13740 583 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 DBF4BQ8NFT6 615 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 HPS3Q969F9 1004 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 PRIMPOLQ96LW4 560 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 FIZ1Q96SL8 496 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 ERVK-5Q9HDB9 667 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 PCDHA5Q9Y5H7 936 aa16.02■□□□□ 0.16
BRCA1-223ENST00000494123 ACTN1P12814 892 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 ZSCAN20P17040 1043 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PSMD2Q13200 908 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 FTHL17Q9BXU8 183 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 FZD8Q9H461 694 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 SLC39A2Q9NP94 309 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PIN4Q9Y237 131 aaKnown RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PCDHB13Q9Y5F0 798 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 TET1Q8NFU7 2136 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 CEP290O15078 2479 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 ACKR2O00590 384 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms