RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TMEM199Q8N511 208 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 BICD1Q96G01 975 aa16.42■□□□□ 0.22
ACTB-213ENST00000493945 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
ACTB-213ENST00000493945 A0A087WZ62 844 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 PSMA7O14818 248 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 SLC16A4O15374 487 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 RPS6KA5O75582 802 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 PFKMP08237 780 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 DARSP14868 501 aaKnown RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 AXLP30530 894 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 TMEM62Q0P6H9 643 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 PAK2Q13177 524 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 DRP2Q13474 957 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 HIC1Q14526 733 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 TSHZ1Q6ZSZ6 1077 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 HAUS6Q7Z4H7 955 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 SPATA20Q8TB22 786 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 DPF3Q92784 378 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 APBB2Q92870 758 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 KCNN1Q92952 543 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 ACCSQ96QU6 501 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 OSMRQ99650 979 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 FDXACB1Q9BRP7 624 aaPredicted RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 NOC4LQ9BVI4 516 aaKnown RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 MRPL4Q9BYD3 311 aaKnown RBP16.41■□□□□ 0.22
ACTB-213ENST00000493945 ARHGAP28Q9P2N2 729 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 TBX21Q9UL17 535 aa16.41■□□□□ 0.22
ACTB-213ENST00000493945 KLRC4O43908 158 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 GPR32O75388 356 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 PRKCBP05771 671 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 CCDC192P0DO97 292 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 CASP1P29466 404 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 ZNF720Q7Z2F6 126 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 C7orf61Q8IZ16 206 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 ZBTB10Q96DT7 871 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 PPP1R16BQ96T49 567 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 ADPGKQ9BRR6 497 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 NAT10Q9H0A0 1025 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 ADAMTS10Q9H324 1103 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
ACTB-213ENST00000493945 SIP14410 1827 aa16.4■□□□□ 0.22
ACTB-213ENST00000493945 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 HNRNPDLO14979 420 aaKnown RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 TIMP1P01033 207 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 LIG4P49917 911 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 SNRPFP62306 86 aaKnown RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 GTF2BQ00403 316 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 MGAT3Q09327 533 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 STX1AQ16623 288 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 FAM187BQ17R55 369 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 COBLL1Q53SF7 1204 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 HACE1Q8IYU2 909 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 MLKLQ8NB16 471 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 TMEM161BQ8NDZ6 487 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 BSNDQ8WZ55 320 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 SEPT8Q92599 483 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 TSG101Q99816 390 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 LBHD1Q9BQE6 289 aaPredicted RBP16.39■□□□□ 0.21
ACTB-213ENST00000493945 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 TBC1D7Q9P0N9 293 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 MAN1B1Q9UKM7 699 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
ACTB-213ENST00000493945 ACKR2O00590 384 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 N4BP3O15049 544 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 EFCAB14O75071 495 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 CAVIN2O95810 425 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 ACTN1P12814 892 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 EHHADHQ08426 723 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 PPIGQ13427 754 aaKnown RBP eCLIP16.38■□□□□ 0.21
ACTB-213ENST00000493945 FBXO47Q5MNV8 452 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 SLFN12LQ6IEE8 588 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 NOTUMQ6P988 496 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 ZPBP2Q6X784 338 aa16.38■□□□□ 0.21
ACTB-213ENST00000493945 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms