RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FZD1Q9UP38 647 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 HDAC5Q9UQL6 1122 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 TNFRSF18Q9Y5U5 241 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
SMC4-223ENST00000493695 E9PSI1 815 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 PPFIA4O75335 1185 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 GYPEP15421 78 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 MYBPC3Q14896 1274 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 PIK3R6Q5UE93 754 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 LRP10Q7Z4F1 713 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 LENG9Q96B70 501 aa6.34□□□□□ -1.39
SMC4-223ENST00000493695 NOL10Q9BSC4 688 aaKnown RBP6.34□□□□□ -1.39
SMC4-223ENST00000493695 B3GALT2O43825 422 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 FSBPO95073 299 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 MECP2P51608 486 aaKnown RBP6.33□□□□□ -1.4
SMC4-223ENST00000493695 SERINC3Q13530 473 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 MAN2A1Q16706 1144 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 C1QL3Q5VWW1 255 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 LRRC55Q6ZSA7 311 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 PHYKPLQ8IUZ5 450 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 VOPP1Q96AW1 172 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 POFUT1Q9H488 388 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 ING3Q9NXR8 418 aa6.33□□□□□ -1.4
SMC4-223ENST00000493695 KCNQ2O43526 872 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 LMNAP02545 664 aaKnown RBP6.32□□□□□ -1.4
SMC4-223ENST00000493695 LAG3P18627 525 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 NR4A1P22736 598 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 PROZP22891 400 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 FLT3P36888 993 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 ADCY1Q08828 1119 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 EPHA7Q15375 998 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 STRIP1Q5VSL9 837 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 UBE2R2Q712K3 238 aaPredicted RBP6.32□□□□□ -1.4
SMC4-223ENST00000493695 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
SMC4-223ENST00000493695 HIST1H2AHQ96KK5 128 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 HIST1H2AJQ99878 128 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 MYL10Q9BUA6 226 aa6.32□□□□□ -1.4
SMC4-223ENST00000493695 ZAR1LA6NP61 321 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 MASP2O00187 686 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 NRP1O14786 923 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 PLD2O14939 933 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
SMC4-223ENST00000493695 PCDH8O95206 1070 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 ADRA1BP35368 520 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 ZNF460Q14592 562 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 PLEKHG4Q58EX7 1191 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 DCAF17Q5H9S7 520 aaPredicted RBP6.31□□□□□ -1.4
SMC4-223ENST00000493695 HECTD2Q5U5R9 776 aa6.31□□□□□ -1.4
SMC4-223ENST00000493695 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
SMC4-223ENST00000493695 ELF4Q99607 663 aaPredicted RBP6.31□□□□□ -1.4
SMC4-223ENST00000493695 HOXA3O43365 443 aaPredicted RBP6.3□□□□□ -1.4
SMC4-223ENST00000493695 OPHN1O60890 802 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 ALDH1A2O94788 518 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 ASLP04424 464 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 CASRP41180 1078 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 IL12RB1P42701 662 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 UNQ6494/PRO21346Q6UXR6 183 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 HTR3DQ70Z44 454 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 FAM83AQ86UY5 434 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
SMC4-223ENST00000493695 SUPT20HQ8NEM7 779 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 ZNF768Q9H5H4 540 aaKnown RBP6.3□□□□□ -1.4
SMC4-223ENST00000493695 TRPM5Q9NZQ8 1165 aa6.3□□□□□ -1.4
SMC4-223ENST00000493695 KIAA0355O15063 1070 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 JMJD7P0C870 316 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 USP14P54578 494 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 RHOUQ7L0Q8 258 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 LCORLQ8N3X6 602 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
SMC4-223ENST00000493695 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 ANKFY1Q9P2R3 1169 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 USP18Q9UMW8 372 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 ZKSCAN5Q9Y2L8 839 aa6.29□□□□□ -1.4
SMC4-223ENST00000493695 A0A0A6YYJ9 748 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 ST20-MTHFSA0A0A6YYL1 179 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 GRXCR1A8MXD5 290 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 TRIM24O15164 1050 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 LPXNO60711 386 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 DNAJC6O75061 913 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 CFAP100Q494V2 611 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
SMC4-223ENST00000493695 ESRP1Q6NXG1 681 aaKnown RBP6.28□□□□□ -1.4
SMC4-223ENST00000493695 OSBPL6Q9BZF3 934 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 KCNH6Q9H252 994 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 SPON1Q9HCB6 807 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 B4GALT6Q9UBX8 382 aa6.28□□□□□ -1.4
SMC4-223ENST00000493695 MTSS1O43312 755 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 GAAP10253 952 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 APOBEC3AP31941 199 aaPredicted RBP6.27□□□□□ -1.41
SMC4-223ENST00000493695 CSRP2Q16527 193 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 SOGA3Q5TF21 947 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 OLFML1Q6UWY5 402 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 ADGRG3Q86Y34 549 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms