RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CCDC144BQ3MJ40 725 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 CEP85LQ5SZL2 805 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 CELF3Q5SZQ8 465 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 OLFML2BQ68BL8 750 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 LUZP1Q86V48 1076 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 AOPEPQ8N6M6 819 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 EMID1Q96A84 441 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 SPDL1Q96EA4 605 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 RSRC1Q96IZ7 334 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 TINF2Q9BSI4 451 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 TRIM7Q9C029 511 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 KATNBL1Q9H079 304 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 ABHD16BQ9H3Z7 469 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 PDE11AQ9HCR9 933 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 WRAP73Q9P2S5 460 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 SEL1LQ9UBV2 794 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 PPME1Q9Y570 386 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 CAPN7Q9Y6W3 813 aa7.89□□□□□ -1.15
SMARCE1-211ENST00000493660 ZSWIM8A7E2V4 1837 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 A0A087WWV3 80 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 ARHGEF35A5YM69 484 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 GGPS1O95749 300 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 KRT18P05783 430 aaKnown RBP7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 FCGRTP55899 365 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 DEUP1Q05D60 604 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 COASYQ13057 564 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 GIT2Q14161 759 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 ARSHQ5FYA8 562 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 MFSD4BQ5TF39 518 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 TAPT1Q6NXT6 567 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 C1orf186Q6ZWK4 172 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 CYFIP1Q7L576 1253 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 OTUD6AQ7L8S5 288 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 FBXO16Q8IX29 292 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 ATL2Q8NHH9 583 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 NPLOC4Q8TAT6 608 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 LMBR1Q8WVP7 490 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 SEPT1Q8WYJ6 367 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 DHTKD1Q96HY7 919 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 APBA2Q99767 749 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 PANK4Q9NVE7 773 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 RWDD2AQ9UIY3 292 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 EMSYQ7Z589 1322 aa7.88□□□□□ -1.15
SMARCE1-211ENST00000493660 TNPO2O14787 897 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PSMA7O14818 248 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SHOX2O60902 331 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TBCAO75347 108 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 LGR5O75473 907 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ERLIN1O75477 346 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SNAI1O95863 264 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 NAT1P18440 290 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 YWHABP31946 246 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SLC8A1P32418 973 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ARHGAP25P42331 645 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 RANBP1P43487 201 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 RARRES1P49788 294 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SMTNP53814 917 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PAK1Q13153 545 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 LAMC2Q13753 1193 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 NCAPHQ15003 741 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 UGCGQ16739 394 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ARMC3Q5W041 872 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 RSRC2Q7L4I2 434 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 DYMQ7RTS9 669 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ARHGAP22Q7Z5H3 698 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GUF1Q8N442 669 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PIGOQ8TEQ8 1089 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 DTNBP1Q96EV8 351 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PPP1R13BQ96KQ4 1090 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 FAM167AQ96KS9 214 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 RMDN2Q96LZ7 410 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ZIC5Q96T25 663 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 MLXIPQ9HAP2 919 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ZNF302Q9NR11 478 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 KLC4Q9NSK0 619 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TRMT1Q9NXH9 659 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 UTP6Q9NYH9 597 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GABBR1Q9UBS5 961 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 COL4A3BPQ9Y5P4 624 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SYNRGQ9UMZ2 1314 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SIP14410 1827 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GSTTP1A0A1W2PQM5 241 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 BICDL2A1A5D9 508 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 AOC2O75106 756 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 STBD1O95210 358 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 ARIH2O95376 493 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 GH1P01241 217 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 IGHA2P01877 340 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 TXNP10599 105 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 XRCC5P13010 732 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 IDEP14735 1019 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 PRCPP42785 496 aa7.87□□□□□ -1.15
SMARCE1-211ENST00000493660 SLC26A2P50443 739 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms