RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 FAM102BQ5T8I3 360 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 DBF4BQ8NFT6 615 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 IFIH1Q9BYX4 1025 aaKnown RBP12.85□□□□□ -0.35
CTSA-209ENST00000493522 SCAND2PQ9GZW5 306 aaPredicted RBP12.85□□□□□ -0.35
CTSA-209ENST00000493522 CDHR5Q9HBB8 845 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 PCDHA7Q9UN72 937 aa12.85□□□□□ -0.35
CTSA-209ENST00000493522 A0A087WZ62 844 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 PI4K2BG5E9Z4 385 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 GPR32O75388 356 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 PLA2G4BP0C869 781 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 CYP11B2P19099 503 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 CD52P31358 61 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 STAT6P42226 847 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 CRYBB1P53674 252 aaPredicted RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 TFDP1Q14186 410 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 SHC4Q6S5L8 630 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.359e-11■■■■□ 23.1
CTSA-209ENST00000493522 ZNF410Q86VK4 478 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 GJD3Q8N144 294 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 ZNF710Q8N1W2 664 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 PDILTQ8N807 584 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 TMEM40Q8WWA1 233 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 RAD54LQ92698 747 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTSA-209ENST00000493522 MRPL38Q96DV4 380 aaKnown RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 FDXACB1Q9BRP7 624 aaPredicted RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 C17orf80Q9BSJ5 609 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 STK17AQ9UEE5 414 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 NOC2LQ9Y3T9 749 aaKnown RBP12.84□□□□□ -0.35
CTSA-209ENST00000493522 TTC3P53804 2025 aa12.84□□□□□ -0.35
CTSA-209ENST00000493522 FNDC1Q4ZHG4 1894 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 FAM86C2PA6NEL3 165 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 KRT18P05783 430 aaKnown RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 SRGAP2CP0DJJ0 459 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 PHKA2P46019 1235 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 CDC42EP1Q00587 391 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 RAD51AP2Q09MP3 1159 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 MCM6Q14566 821 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 TIGD5Q53EQ6 642 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 AXDND1Q5T1B0 1012 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 CCDC73Q6ZRK6 1079 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 RNF149Q8NC42 400 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 LRRC15Q8TF66 581 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 APBB2Q92870 758 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 YME1L1Q96TA2 773 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 AGO3Q9H9G7 860 aaKnown RBP12.83□□□□□ -0.36
CTSA-209ENST00000493522 C11orf16Q9NQ32 467 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 FAM13BQ9NYF5 915 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 SQORQ9Y6N5 450 aa12.83□□□□□ -0.36
CTSA-209ENST00000493522 A0A087X0B3 334 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 LRRIQ4A6NIV6 560 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 ASAP2O43150 1006 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 HIP1RO75146 1068 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 DARSP14868 501 aaKnown RBP12.82□□□□□ -0.36
CTSA-209ENST00000493522 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTSA-209ENST00000493522 GLRA2P23416 452 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 ARL2P36404 184 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 SLC12A3P55017 1021 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
CTSA-209ENST00000493522 CAPSQ13938 189 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 RESP18Q5W5W9 173 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
CTSA-209ENST00000493522 RINT1Q6NUQ1 792 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 FAM228AQ86W67 206 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.82□□□□□ -0.36
CTSA-209ENST00000493522 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms