RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RAD9AQ99638 391 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 C7orf25Q9BPX7 421 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 KCND2Q9NZV8 630 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 LAMA3Q16787 3333 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 FAM13AO94988 1023 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 MYL1P05976 194 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
MSH6-208ENST00000493177 TAP1Q03518 808 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 MGAT3Q09327 533 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 PAK2Q13177 524 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 EMC2Q15006 297 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 CCDC85BQ15834 202 aaPredicted RBP14.84□□□□□ -0.03
MSH6-208ENST00000493177 ARSHQ5FYA8 562 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSH6-208ENST00000493177 EXOC8Q8IYI6 725 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 NME8Q8N427 588 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 PPP1R16BQ96T49 567 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 JPH2Q9BR39 696 aaPredicted RBP14.84□□□□□ -0.03
MSH6-208ENST00000493177 REEP2Q9BRK0 252 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 SUGCTQ9HAC7 445 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 POLD4Q9HCU8 107 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 INSL6Q9Y581 213 aa14.84□□□□□ -0.03
MSH6-208ENST00000493177 LCHNA4D1U4 455 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 ZBTB42B2RXF5 422 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 MAGEB2O15479 319 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 HIP1RO75146 1068 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.04
MSH6-208ENST00000493177 RPN1P04843 607 aaKnown RBP14.83□□□□□ -0.04
MSH6-208ENST00000493177 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 TMOD1P28289 359 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 CD52P31358 61 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 DPYDQ12882 1025 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 GIT2Q14161 759 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 LPIN1Q14693 890 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 CCDC65Q8IXS2 484 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 USP38Q8NB14 1042 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 MCPH1Q8NEM0 835 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 MAP7D2Q96T17 732 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 TIPINQ9BVW5 301 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 CELF4Q9BZC1 486 aaKnown RBP14.83□□□□□ -0.04
MSH6-208ENST00000493177 OSBPL7Q9BZF2 842 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 GZF1Q9H116 711 aaPredicted RBP14.83□□□□□ -0.04
MSH6-208ENST00000493177 TSPYL2Q9H2G4 693 aaPredicted RBP14.83□□□□□ -0.04
MSH6-208ENST00000493177 PANK4Q9NVE7 773 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 AKT3Q9Y243 479 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
MSH6-208ENST00000493177 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 RALGAPA2Q2PPJ7 1873 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 RFXAPO00287 272 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 C22orf31O95567 290 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 EFCAB12Q6NXP0 572 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 UNC13DQ70J99 1090 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 LRRC71Q8N4P6 559 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 TMEM143Q96AN5 459 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 DNAJC19Q96DA6 116 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 DRC1Q96MC2 740 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 TGS1Q96RS0 853 aaKnown RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 CEP89Q96ST8 783 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 POLR3FQ9H1D9 316 aaPredicted RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 DHX33Q9H6R0 707 aaKnown RBP14.82□□□□□ -0.04
MSH6-208ENST00000493177 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 XPNPEP1Q9NQW7 623 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 EXOC1Q9NV70 894 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 RMND1Q9NWS8 449 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 KIAA1468Q9P260 1216 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 ODF2LQ9ULJ1 636 aa14.82□□□□□ -0.04
MSH6-208ENST00000493177 LINC01553A4QN01 128 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 SFI1A8K8P3 1242 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 BIN1O00499 593 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 RPS6KA5O75582 802 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 DNM2P50570 870 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 CLCN3P51790 818 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 ADGRE1Q14246 886 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 KMT5BQ4FZB7 885 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 HERC4Q5GLZ8 1057 aaPredicted RBP14.81□□□□□ -0.04
MSH6-208ENST00000493177 ISM2Q6H9L7 571 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 MYCT1Q8N699 235 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 TCP11Q8WWU5 503 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 KIFAP3Q92845 792 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 TOP1MTQ969P6 601 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 FTHL17Q9BXU8 183 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 PARVGQ9HBI0 331 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 COL4A3BPQ9Y5P4 624 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 SQORQ9Y6N5 450 aa14.81□□□□□ -0.04
MSH6-208ENST00000493177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.8□□□□□ -0.04
MSH6-208ENST00000493177 PVALEFA0A1B0GWK0 134 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 GAS2O43903 313 aaKnown RBP14.8□□□□□ -0.04
MSH6-208ENST00000493177 ARHGEF15O94989 841 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 VTNP04004 478 aa14.8□□□□□ -0.04
MSH6-208ENST00000493177 GAP43P17677 238 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms