RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SAPCD2Q86UD0 394 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 FOXP4Q8IVH2 680 aaPredicted RBP8.09□□□□□ -1.11
TPR-208ENST00000492973 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 PDZD8Q8NEN9 1154 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.09□□□□□ -1.11
TPR-208ENST00000492973 MICAL1Q8TDZ2 1067 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 MAP4K1Q92918 833 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 DYNLL2Q96FJ2 89 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 CLMNQ96JQ2 1002 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 FGD4Q96M96 766 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 ZNF341Q9BYN7 854 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 GBP3Q9H0R5 595 aa8.09□□□□□ -1.11
TPR-208ENST00000492973 UPF2Q9HAU5 1272 aaKnown RBP8.09□□□□□ -1.11
TPR-208ENST00000492973 SSU72P8A0A1W2PR75 194 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 B2RBV5 119 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 FKTNO75072 461 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 FGAP02671 866 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 APPP05067 770 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 HLA-DOAP06340 250 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 RPL10P27635 214 aaKnown RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 SHMT1P34896 483 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 TDO2P48775 406 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ZNF143P52747 638 aaPredicted RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 HUNKP57058 714 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ERVFC1P60507 584 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 JAG1P78504 1218 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 DUSP4Q13115 394 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 FXNQ16595 210 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 RTP2Q5QGT7 225 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ANKS3Q6ZW76 656 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 ARMC9Q7Z3E5 817 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 FAM178BQ8IXR5 827 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 HNRNPLLQ8WVV9 542 aaKnown RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 HOOK2Q96ED9 719 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 NOL6Q9H6R4 1146 aaKnown RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.08□□□□□ -1.12
TPR-208ENST00000492973 HERC5Q9UII4 1024 aaKnown RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 SERPINB13Q9UIV8 391 aa8.08□□□□□ -1.12
TPR-208ENST00000492973 DIS3Q9Y2L1 958 aaKnown RBP8.08□□□□□ -1.12
TPR-208ENST00000492973 PPM1BO75688 479 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ENDOUP21128 410 aaKnown RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 VGLL4Q14135 290 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 NECTIN1Q15223 517 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 NR0B2Q15466 257 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 SHROOM1Q2M3G4 852 aaPredicted RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 CWF19L1Q69YN2 538 aaKnown RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 TATDN1Q6P1N9 297 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ARHGEF39Q8N4T4 335 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ADCY4Q8NFM4 1077 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ZKSCAN4Q969J2 545 aaPredicted RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 RCC1LQ96I51 464 aaKnown RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 WRNIP1Q96S55 665 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 NAPBQ9H115 298 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ARPP21Q9UBL0 812 aaPredicted RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 APEX2Q9UBZ4 518 aa8.07□□□□□ -1.12
TPR-208ENST00000492973 ABT1Q9ULW3 272 aaKnown RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 SF3B6Q9Y3B4 125 aaKnown RBP8.07□□□□□ -1.12
TPR-208ENST00000492973 ZMYM6O95789 1325 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 POLR2AP24928 1970 aaKnown RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 AK9Q5TCS8 1911 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 RASSF10A6NK89 507 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 RAC2P15153 192 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 HSPA4P34932 840 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 PPARAQ07869 468 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 MRM1Q6IN84 353 aaKnown RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 RGMBQ6NW40 437 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 C16orf86Q6ZW13 317 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 ADAT2Q7Z6V5 191 aaKnown RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 ZSWIM9Q86XI8 627 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 ANKRD13AQ8IZ07 590 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 OXR1Q8N573 874 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 CELF2-AS1Q8N7Q2 184 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 ANKS4BQ8N8V4 417 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 FAM168AQ92567 244 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 ASIC4Q96FT7 647 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 HHIPL1Q96JK4 782 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 FCRL2Q96LA5 508 aaPredicted RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 INCENPQ9NQS7 918 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 ANAPC4Q9UJX5 808 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPR-208ENST00000492973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.06□□□□□ -1.12
TPR-208ENST00000492973 ROBO3Q96MS0 1386 aa8.06□□□□□ -1.12
TPR-208ENST00000492973 PAPPA2Q9BXP8 1791 aa8.05□□□□□ -1.12
TPR-208ENST00000492973 FITM1A5D6W6 292 aa8.05□□□□□ -1.12
TPR-208ENST00000492973 NOTOA8MTQ0 251 aa8.05□□□□□ -1.12
TPR-208ENST00000492973 CTNND1O60716 968 aaKnown RBP8.05□□□□□ -1.12
TPR-208ENST00000492973 PRDM1O75626 825 aa8.05□□□□□ -1.12
TPR-208ENST00000492973 AKR1B1P15121 316 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms