RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 SYNRGQ9UMZ2 1314 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 TROVE2P10155 538 aaKnown RBP eCLIP5.75□□□□□ -1.49
FN1-224ENST00000492816 THOP1P52888 689 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PDCLQ13371 301 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 HIST2H2ACQ16777 129 aaPredicted RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 HIST2H2AA3Q6FI13 130 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PPP1R12CQ9BZL4 782 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 IRF2BPLQ9H1B7 796 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PARVGQ9HBI0 331 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 CKMP06732 381 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ZSCAN22P10073 491 aaPredicted RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 SLMAPQ14BN4 828 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 RCSD1Q6JBY9 416 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PDZD8Q8NEN9 1154 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 MCUR1Q96AQ8 359 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 LSM14BQ9BX40 385 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 SUN2Q9UH99 717 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 SGK1O00141 431 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 CLIC2O15247 247 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ALDH2P05091 517 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 TRAPPC10P48553 1259 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 GLYCTKQ8IVS8 523 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PDCD7Q8N8D1 485 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 REXO5Q96IC2 774 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 CARD6Q9BX69 1037 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PSD3Q9NYI0 1048 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 HDAC6Q9UBN7 1215 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 MED23Q9ULK4 1368 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 UBE2Q2LH0YL09 131 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PDE8BO95263 885 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 INHBAP08476 426 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 CYP2C9P11712 490 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 BRD2P25440 801 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 MTMR2Q13614 643 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ALG11Q2TAA5 492 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 DARS2Q6PI48 645 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.75□□□□□ -1.491e-323■■■□□ 15.1
FN1-224ENST00000492816 KRCC1Q9NPI7 259 aaPredicted RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 ZBTB1Q9Y2K1 713 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 PSMD3O43242 534 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 MYL4P12829 197 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 RASSF7Q02833 373 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 AARS2Q5JTZ9 985 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 TADA1Q96BN2 335 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 MEIS3Q99687 375 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ASPSCR1Q9BZE9 553 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 SARS2Q9NP81 518 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 NEURL1BA8MQ27 555 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 H0Y626 953 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ADCY3O60266 1144 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 FGF19O95750 216 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ZNF24P17028 368 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 SERPINB6P35237 376 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 CLK3P49761 638 aaKnown RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 PPIL2Q13356 520 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ANKRD20A3Q5VUR7 823 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 NOTUMQ6P988 496 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 RUFY3Q7L099 469 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 MMGT1Q8N4V1 131 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 TTC8Q8TAM2 541 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 CDCA7LQ96GN5 454 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 ERAP1Q9NZ08 941 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 KLHL8Q9P2G9 620 aaPredicted RBP5.75□□□□□ -1.49
FN1-224ENST00000492816 POLKQ9UBT6 870 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 KLF15Q9UIH9 416 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 GUCA1BQ9UMX6 200 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 SPATA31A3Q5VYP0 1347 aa5.75□□□□□ -1.49
FN1-224ENST00000492816 GUCA1CO95843 209 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 SYF2O95926 243 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 HSPA1AP0DMV8 641 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 HSPA1BP0DMV9 641 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 GEMIN4P57678 1058 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 CAPRIN1Q14444 709 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 SEPT2Q15019 361 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 MTFR1Q15390 333 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 PRAMEF18Q5VWM3 479 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 ANKRD44Q8N8A2 993 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 SLC20A1Q8WUM9 679 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 POP1Q99575 1024 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 PBRM1Q86U86 1689 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 GOLGA8SH3BPF8 625 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 CES2O00748 559 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 CIAO1O76071 339 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 MBL2P11226 248 aaPredicted RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 ADCY8P40145 1251 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 CENPAP49450 140 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 RPS6KA1Q15418 735 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 ZC3H12BQ5HYM0 836 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 EPHA10Q5JZY3 1008 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 CASS4Q9NQ75 786 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 NMRK1Q9NWW6 199 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 APPL1Q9UKG1 709 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 ZNF148Q9UQR1 794 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 CAPN7Q9Y6W3 813 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 PCF11O94913 1555 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 SAMD9Q5K651 1589 aa5.74□□□□□ -1.49
FN1-224ENST00000492816 DIS3L2Q8IYB7 885 aaKnown RBP5.74□□□□□ -1.49
FN1-224ENST00000492816 C7orf61Q8IZ16 206 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms