RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	ZBTB3	Q9H5J0	574 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	ARL2BP	Q9Y2Y0	163 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	PPME1	Q9Y570	386 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	hCG_1642624	A0A1W2PR95	340 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	FSCN2	O14926	492 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	KIF5B	P33176	963 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	MAGEA8	P43361	318 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	MYO1E	Q12965	1108 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	SFMBT2	Q5VUG0	894 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	KRT26	Q7Z3Y9	468 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	PTPRN2	Q92932	1015 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	CEP95	Q96GE4	821 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	EMILIN3	Q9NT22	766 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	KIAA1024	Q9UPX6	916 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	SYNGAP1	Q96PV0	1343 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	TRIM64C	A6NLI5	447 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	DCDC2C	A8MYV0	355 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	HGS	O14964	777 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	KCNA4	P22459	653 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	CIITA	P33076	1130 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	SULT2A1	Q06520	285 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	CLEC4G	Q6UXB4	293 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	ZDHHC14	Q8IZN3	488 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	PANK4	Q9NVE7	773 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	IL1RAPL1	Q9NZN1	696 aa		11.12	□□□□□ -0.63
SREBF2-208	ENST00000491541	ASMTL	O95671	621 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ADRA2B	P18089	450 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	LMNB1	P20700	586 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	CDC25C	P30307	473 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ALDH5A1	P51649	535 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	SH3BGR	P55822	239 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	KLF1	Q13351	362 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	MEX3C	Q5U5Q3	659 aa	Known RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	FOXB2	Q5VYV0	432 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	KIF6	Q6ZMV9	814 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	NSMCE1	Q8WV22	266 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	C1orf21	Q9H246	121 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	GOLGA6L10	A0A0M3HER8	536 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	CYP1A2	P05177	515 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	IDO1	P14902	403 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ANKRD20A2	Q5SQ80	823 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ANKRD20A1	Q5TYW2	823 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ANKRD20A3	Q5VUR7	823 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	PLK2	Q9NYY3	685 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	MPHOSPH10	O00566	681 aa	Known RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ATP4A	P20648	1035 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	MTIF2	P46199	727 aa	Known RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	GFPT1	Q06210	699 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	NR1H3	Q13133	447 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	TXNRD1	Q16881	649 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	C16orf86	Q6ZW13	317 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	CABP7	Q86V35	215 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	EXOC3L1	Q86VI1	746 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	STK32A	Q8WU08	396 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	RFFL	Q8WZ73	363 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	PLIN2	Q99541	437 aa		11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.11	□□□□□ -0.63
SREBF2-208	ENST00000491541	CAMTA2	O94983	1202 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	TTLL1	O95922	423 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	AFP	P02771	609 aa	Known RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	GABPA	Q06546	454 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	TRADD	Q15628	312 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	ZNF174	Q15697	407 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	TAZ	Q16635	292 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	TDRD12	Q587J7	1177 aa	Known RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	LNX1	Q8TBB1	728 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	C10orf82	Q8WW14	230 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	DHX38	Q92620	1227 aa	Known RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	KIF9	Q9HAQ2	790 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	KCND2	Q9NZV8	630 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	CASQ2	O14958	399 aa	Predicted RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	C3orf62	Q6ZUJ4	267 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	HAS1	Q92839	578 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	CCDC113	Q9H0I3	377 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	KIAA1586	Q9HCI6	787 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	DDX3X	O00571	662 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	OPLAH	O14841	1288 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	CYP3A4	P08684	503 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	PON1	P27169	355 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	MSH2	P43246	934 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	KCNC4	Q03721	635 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	INTS5	Q6P9B9	1019 aa	Known RBP	11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	KLHL7	Q8IXQ5	586 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	MS4A14	Q96JA4	679 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	YIPF3	Q9GZM5	350 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	PADI4	Q9UM07	663 aa		11.1	□□□□□ -0.63
SREBF2-208	ENST00000491541	SMIM23	A6NLE4	172 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	PTPRO	Q16827	1216 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	SCFD1	Q8WVM8	642 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	STAMBPL1	Q96FJ0	436 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	GPAM	Q9HCL2	828 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	BUB1	O43683	1085 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	TYROBP	O43914	113 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	GZMA	P12544	262 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	CHN1	P15882	459 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	CRABP2	P29373	138 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	PMS2	P54278	862 aa		11.09	□□□□□ -0.63
SREBF2-208	ENST00000491541	SLC45A4	Q5BKX6	768 aa		11.09	□□□□□ -0.63

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