RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SF3A1Q15459 793 aaKnown RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 TMEM143Q96AN5 459 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 DNAJC19Q96DA6 116 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 C17orf80Q9BSJ5 609 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 ZSCAN16Q9H4T2 348 aaPredicted RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 PDIA4P13667 645 aaKnown RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 GATMP50440 423 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 MXD4Q14582 209 aaPredicted RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 CEP170P1Q96L14 293 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 FAM49AQ9H0Q0 323 aaPredicted RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 GPRC5CQ9NQ84 441 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 NT5DC1Q5TFE4 455 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 OTUD6AQ7L8S5 288 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 FAM184AQ8NB25 1140 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 MYLIPQ8WY64 445 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 JPH2Q9BR39 696 aaPredicted RBP10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 TIPINQ9BVW5 301 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 TMEM134Q9H6X4 195 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 ATP6V0A4Q9HBG4 840 aa10.23□□□□□ -0.77
SUPT20H-220ENST00000490716 OFD1O75665 1012 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 AXLP30530 894 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 AFF1P51825 1210 aaKnown RBP10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 BCL7CQ8WUZ0 217 aaPredicted RBP10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 TCP11Q8WWU5 503 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 HPSEQ9Y251 543 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 STYXL1Q9Y6J8 313 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 NAMPTP43490 491 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 PLCB3Q01970 1234 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 FAM102BQ5T8I3 360 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 TMEM184AQ6ZMB5 413 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 CCDC51Q96ER9 411 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 A0A087WWV3 80 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 E9PMD0 336 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 RPS6KA5O75582 802 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 PDCP20941 246 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 CDC25AP30304 524 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 SHC4Q6S5L8 630 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 PRIMPOLQ96LW4 560 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 TGS1Q96RS0 853 aaKnown RBP10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 ADAM2Q99965 735 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 MTIF3Q9H2K0 278 aaKnown RBP10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 PDZD7Q9H5P4 517 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 C17orf75Q9HAS0 396 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 RCOR1Q9UKL0 485 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 NOL7Q9UMY1 257 aaKnown RBP10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
SUPT20H-220ENST00000490716 RB1P06400 928 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 ARF4P18085 180 aaPredicted RBP10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 FGFR4P22455 802 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 BMPR1AP36894 532 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 FAM173BQ6P4H8 233 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 PADI6Q6TGC4 694 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 CSRNP2Q9H175 543 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 DDX19AQ9NUU7 478 aaKnown RBP10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 LRWD1Q9UFC0 647 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 LZTS1Q9Y250 596 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 F13A1P00488 732 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 ZSCAN22P10073 491 aaPredicted RBP10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 MAPTP10636 758 aaKnown RBP10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 GIT2Q14161 759 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 TMEM192Q8IY95 271 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 TMEM161BQ8NDZ6 487 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 KIF3AQ9Y496 699 aa10.21□□□□□ -0.77
SUPT20H-220ENST00000490716 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 TLL1O43897 1013 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 BMP15O95972 392 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 LTBRP36941 435 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 ATL3Q6DD88 541 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 SLC39A4Q6P5W5 647 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 SPPL3Q8TCT6 385 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 MSRAQ9UJ68 235 aa10.21□□□□□ -0.78
SUPT20H-220ENST00000490716 B4GALT5O43286 388 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 YEATS4O95619 227 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 TMOD1P28289 359 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 HAUS3Q68CZ6 603 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 DTHD1Q6ZMT9 781 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 RHPN2Q8IUC4 686 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 PSPC1Q8WXF1 523 aaKnown RBP10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 RAD54LQ92698 747 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 EPSTI1Q96J88 318 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 KIAA1024Q9UPX6 916 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 RFXAPO00287 272 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 CSDE1O75534 798 aaKnown RBP10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 ITGB1P05556 798 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 HOXD13P35453 343 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 MCPH1Q8NEM0 835 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 MRPL38Q96DV4 380 aaKnown RBP10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 LMAN2LQ9H0V9 348 aa10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 POLR3FQ9H1D9 316 aaPredicted RBP10.2□□□□□ -0.78
SUPT20H-220ENST00000490716 PRDM12Q9H4Q4 367 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms