RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
COL2A1-207ENST00000490609 SMC1AQ14683 1233 aaKnown RBP17.48■□□□□ 0.39
COL2A1-207ENST00000490609 MOXD1Q6UVY6 613 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 ABI1Q8IZP0 508 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 HAS1Q92839 578 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 IGSF21Q96ID5 467 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 KCNMB3Q9NPA1 279 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 TBC1D13Q9NVG8 400 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 IRAK3Q9Y616 596 aa17.48■□□□□ 0.39
COL2A1-207ENST00000490609 PTPRZ1P23471 2315 aaPredicted RBP17.47■□□□□ 0.39
COL2A1-207ENST00000490609 DEXIO95424 95 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 EPCAMP16422 314 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 HOXA11P31270 313 aaPredicted RBP17.47■□□□□ 0.39
COL2A1-207ENST00000490609 INF2Q27J81 1249 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
COL2A1-207ENST00000490609 UBXN11Q5T124 520 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 AGMOQ6ZNB7 445 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 RHPN2Q8IUC4 686 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 VPS52Q8N1B4 723 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 FAM105AQ9NUU6 356 aa17.47■□□□□ 0.39
COL2A1-207ENST00000490609 ZBTB39O15060 712 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 LILRB3O75022 631 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 DDHD2O94830 711 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 BRD1O95696 1058 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 CTSAP10619 480 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 AVPR2P30518 371 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 SLC11A1P49279 550 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 ALDH7A1P49419 539 aaKnown RBP17.46■□□□□ 0.39
COL2A1-207ENST00000490609 STK3Q13188 491 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
COL2A1-207ENST00000490609 DDX53Q86TM3 631 aaKnown RBP17.46■□□□□ 0.39
COL2A1-207ENST00000490609 ZNF410Q86VK4 478 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 CASP10Q92851 521 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 TM6SF1Q9BZW5 370 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.39
COL2A1-207ENST00000490609 ZC3H11AO75152 810 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL2A1-207ENST00000490609 PSMC5P62195 406 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 CDC42EP1Q00587 391 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 ITIH3Q06033 890 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 SPIRE1Q08AE8 756 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 SCRN1Q12765 414 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 NOMO2Q5JPE7 1267 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 KREMEN2Q8NCW0 462 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 RIPOR3Q96MK2 946 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 MRPL9Q9BYD2 267 aaKnown RBP17.45■□□□□ 0.38
COL2A1-207ENST00000490609 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 DHX33Q9H6R0 707 aaKnown RBP17.45■□□□□ 0.38
COL2A1-207ENST00000490609 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
COL2A1-207ENST00000490609 PIN4Q9Y237 131 aaKnown RBP17.45■□□□□ 0.38
COL2A1-207ENST00000490609 DMXL1Q9Y485 3027 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 FAM186AA6NE01 2351 aa17.45■□□□□ 0.38
COL2A1-207ENST00000490609 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
COL2A1-207ENST00000490609 REC8O95072 547 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 EFEMP2O95967 443 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 NONOQ15233 471 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL2A1-207ENST00000490609 RARS2Q5T160 578 aaKnown RBP17.44■□□□□ 0.38
COL2A1-207ENST00000490609 TWF2Q6IBS0 349 aaKnown RBP17.44■□□□□ 0.38
COL2A1-207ENST00000490609 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 PRPF31Q8WWY3 499 aaKnown RBP17.44■□□□□ 0.38
COL2A1-207ENST00000490609 TMEM143Q96AN5 459 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 AGPAT5Q9NUQ2 364 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 PCDHB2Q9Y5E7 798 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
COL2A1-207ENST00000490609 SRGAP2BP0DMP2 458 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 SFPQP23246 707 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL2A1-207ENST00000490609 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
COL2A1-207ENST00000490609 DNM2P50570 870 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 POLGP54098 1239 aaPredicted RBP17.43■□□□□ 0.38
COL2A1-207ENST00000490609 PTPN5P54829 565 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 PTPN14Q15678 1187 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 PPP4R3AQ6IN85 833 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 GALNT17Q6IS24 598 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 CATSPER4Q7RTX7 472 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
COL2A1-207ENST00000490609 TMEM169Q96HH4 297 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 FAM86C1Q9NVL1 165 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 RGL1Q9NZL6 768 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 INPP5FQ9Y2H2 1132 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
COL2A1-207ENST00000490609 TRIP11Q15643 1979 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.42■□□□□ 0.38
COL2A1-207ENST00000490609 ASGR2P07307 311 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 KIAA1841Q6NSI8 718 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 TAS1R1Q7RTX1 841 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
COL2A1-207ENST00000490609 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
COL2A1-207ENST00000490609 TNFRSF25Q93038 417 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms